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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1256
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 131: /----- GSBRNA2T00032165001 [Brassica napus] (2) /-100+ | \----- XP_013584623.1 [Brassica oleracea] (33) /-100+ | | /----- XP_009145259.1 [Brassica rapa] (93) | \-100+ /-100-+ \----- GSBRNA2T00048439001 [Brassica napus] (97) | | /----76---+ \--------------- Rsa1.0_03095.1_g00001.1 [Raphanus sativus] (19) | | | \--------------------- 676758752 [Sisymbrium irio] (94) | | /----- Rsa1.0_08312.1_g00001.1 [Raphanus sativus] (3) | /---------100--------+ /-100+ | \----- RrC4475_p1 [Raphanus raphanistrum] (36) | | | | | | /---------- GSBRNA2T00158438001 [Brassica napus] (12) | | | | | | | /-59-+ /----- GSBRNA2T00158445001 [Brassica napus] (53) | \-100+ | \-100+ | | | \----- XP_013623226.1 [Brassica oleracea] (76) | | /-100-+ | | | | /----- GSBRNA2T00154829001 [Brassica napus] (57) | | | \---100---+ | \-66-+ \----- XP_009135829.1 [Brassica rapa] (64) | | /-69-+ \--------------------- GSBRNA2T00158442001 [Brassica napus] (24) | | | | /----- Rsa1.0_00052.1_g00007.1 [Raphanus sativus] (4) | | /------100------+ | | | \----- RrC3419_p2 [Raphanus raphanistrum] (20) | | | | | | /----- XP_009108632.1 [Brassica rapa] (11) | | /-100+ /-97-+ | | | | | \----- GSBRNA2T00056228001 [Brassica napus] (22) /-76-+ | | | /-70-+ | | | | | | \---------- GSBRNA2T00085879001 [Brassica napus] (85) | | | | \-100-+ | | \----99---+ | /----- XP_013588127.1 [Brassica oleracea] (13) | | | \---100---+ | | | \----- GSBRNA2T00085882001 [Brassica napus] (34) | | | | | \-------------------------- Tp3g20530 [Thellungiella parvula] (61) | | | \----------------------------------------- Thhalv10020829m [Eutrema salsugineum] (35) | | /----- Araha.5588s0001.1.p [Arabidopsis halleri] (5) /-100-+ /------100------+ | | | \----- 479794 [Arabidopsis lyrata] (95) | | | | | | /---------- Csa15g040580.1 [Camelina sativa] (18) | | /-99-+ | | | | | /-100+ /----- Csa01g026120.1 [Camelina sativa] (81) | | | | | \-100+ | | | \-100-+ \----- Csa19g032090.1 [Camelina sativa] (82) /-100+ | /-100+ | | | | | | \--------------- Carubv10013808m [Capsella rubella] (26) | | | | | | | \------100-----+ \-------------------------- Bostr.19424s0375.1.p [Boechera stricta] (55) | | | /-99-+ | \------------------------------- AT3G22830.1 [Arabidopsis thaliana] (25) | | | | | \---------------------------------------------------- AA17G00081 [Aethionema arabicum] (40) --95-+ | | \--------------------------------------------------------- XP_010525224.1 [Tarenaya hassleriana] (23) | \-------------------------------------------------------------- XP_010556876.1 [Tarenaya hassleriana] (62) Subtree rooted at node 167: /---------- (131) | /---------66---------+ /----- Eucgr.H03412.1.p [Eucalyptus grandis] (43) | \-100+ | \----- EcC042361.20 [Eucalyptus camaldulensis] (48) | | /----- Gh_A09G2227 [Gossypium hirsutum] (9) | /-96-+ | | \----- Cotton_A_16493_BGI-A2_v1.0 [Gossypium arboreum] (86) | /----100---+ | | | /----- Gh_D09G2120 [Gossypium hirsutum] (15) | | \-100+ | | \----- Gorai.006G242400.1 [Gossypium raimondii] (37) | | | | /----- Gh_A10G1028 [Gossypium hirsutum] (45) | /-100+ /-100+ | | | | \----- Cotton_A_37899_BGI-A2_v1.0 [Gossypium arboreum] (59) /-81-+ | | /-100+ | | | | | | /----- Gh_D10G1499 [Gossypium hirsutum] (68) | | | | | \-100+ | | | \-100-+ \----- Gorai.011G168400.1 [Gossypium raimondii] (72) | |-60-+ | | | | \--------------- Thecc1EG020700t1 [Theobroma cacao] (50) | | | | | | /----- orange1.1g018107m [Citrus sinensis] (31) | | | /-100+ /-86-+ | | | \----- Ciclev10006902m [Citrus clementina] (58) | | | \------100------+ | | | | /----- Neem_22125_f_2 [Azadirachta indica] (44) | | | \-100+ | | | \----- Neem_4529_f_2 [Azadirachta indica] (63) | | | /-86-+ | \------------------------------- evm.model.supercontig_44.122 [Carica papaya] (80) | | | | | \------------------------------------ EcC033061.10 [Eucalyptus camaldulensis] (54) | | | | /----- Eucgr.K03325.1.p [Eucalyptus grandis] (65) | \----------------100----------------+ /--66-+ \----- EcC060749.10 [Eucalyptus camaldulensis] (74) | | | | /----- orange1.1g017694m [Citrus sinensis] (30) | | /-100+ | | | \----- Ciclev10020718m [Citrus clementina] (39) | \----------------100----------------+ | | /----- Neem_22908_f_1 [Azadirachta indica] (56) | \-100+ | \----- Neem_524_f_1 [Azadirachta indica] (83) | | /----- Gh_A12G0018 [Gossypium hirsutum] (10) | /-97-+ | | \----- Cotton_A_22025_BGI-A2_v1.0 [Gossypium arboreum] (38) | /-100+ /-51-+ | \---------- Gh_D12G0019 [Gossypium hirsutum] (70) | | | | | /--89-+ /----- Cotton_A_08195_BGI-A2_v1.0 [Gossypium arboreum] (42) | | | | /-100+ | | | | | \----- Gh_A11G1149 [Gossypium hirsutum] (89) | | | \-100+ | | | | /----- Gorai.007G139600.1 [Gossypium raimondii] (88) | | | \-100+ | | /-91-+ \----- Gh_D11G1303 [Gossypium hirsutum] (92) | | | | /-95-+ | | | /----- Gh_A08G0587 [Gossypium hirsutum] (46) | | | | | /-100+ | | | | | | \----- Cotton_A_16993_BGI-A2_v1.0 [Gossypium arboreum] (49) | | \------------99-----------+ \----100---+ | | | | /----- Gh_D08G0680 [Gossypium hirsutum] (47) | | | \-100+ --98-+ | | \----- Gorai.004G076900.1 [Gossypium raimondii] (91) | | | | | \-------------------------- Thecc1EG004275t1 [Theobroma cacao] (41) | | | \--------------------------------------------------------- evm.model.supercontig_52.116 [Carica papaya] (32) | \-------------------------------------------------------------- XP_010545101.1 [Tarenaya hassleriana] (29) Subtree rooted at node 191: /----- (167) /------------98-----------+ | \----- AA18G00096 [Aethionema arabicum] (60) | | /--------------- Cagra.1043s0019.1.p [Capsella grandiflora] (16) | | | | /----- Csa09g058950.1 [Camelina sativa] (17) | /-100-+ /-97-+ /-88-+ | | | \----- Csa04g037730.1 [Camelina sativa] (21) | | | \-100+ | | /-100+ \---------- Csa06g026120.1 [Camelina sativa] (52) | | | | | | | \--------------------- Bostr.6864s0056.1.p [Boechera stricta] (73) | | | /-95-+ \-100+ /----- AT3G51910.1 [Arabidopsis thaliana] (27) | | | /-100+ | | | | \----- Araha.5904s0009.1.p [Arabidopsis halleri] (78) | | \------100------+ /-91-+ | \---------- 485548 [Arabidopsis lyrata] (66) | | | | | \------------------------------------ KFK34438.1 [Arabis alpina] (87) /--96-+ | | | \----------------------------------------- Thhalv10011051m [Eutrema salsugineum] (69) | | | \---------------------------------------------- Tp5g10360 [Thellungiella parvula] (77) | | /---------- XP_009139495.1 [Brassica rapa] (28) /-98-+ | | | /-100+ /----- XP_013631217.1 [Brassica oleracea] (71) | | | \-100+ | | /--93-+ \----- GSBRNA2T00100979001 [Brassica napus] (75) | | | | | \--------------100-------------+ \--------------- RrC14908_p1 [Raphanus raphanistrum] (96) | | | \--------------------- 676791056 [Sisymbrium irio] (79) | /-100+ /----- XP_013593957.1 [Brassica oleracea] (7) | | /-100+ | | | \----- GSBRNA2T00041793001 [Brassica napus] (90) | | /-100+ | | | \---------- GSBRNA2T00151270001 [Brassica napus] (84) | |--------------------98-------------------+ | | \--------------- Rsa1.0_00347.1_g00007.1 [Raphanus sativus] (67) --79-+ | | | /----- RrC2679_p2 [Raphanus raphanistrum] (8) | \------------------------100------------------------+ | \----- Rsa1.0_00347.1_g00006.1 [Raphanus sativus] (14) | | /----- XP_013596160.1 [Brassica oleracea] (6) \---------------------------97---------------------------+ \----- XP_013615677.1 [Brassica oleracea] (99) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00151271001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009137089.1 [Brassica rapa] (98) + | /--------------------------------- (191) \----------------91---------------+ \--------------------------------- XP_009136642.1 [Brassica rapa] (51) |