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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1249
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 153: /----- Carubv10014025m [Capsella rubella] (2) /-100+ | \----- Cagra.9070s0001.1.p [Capsella grandiflora] (80) /-92-+ | \---------- Bostr.18351s0439.1.p [Boechera stricta] (18) /----100---+ | | /----- 480488 [Arabidopsis lyrata] (36) | \---100---+ | \----- AT2G19810.1 [Arabidopsis thaliana] (72) | | /----- GSBRNA2T00138011001 [Brassica napus] (15) | /-100+ | | \----- XP_013593099.1 [Brassica oleracea] (53) | /-100+ | | | /----- XP_009102134.1 [Brassica rapa] (21) | | \-97-+ /-100+ /-100-+ \----- GSBRNA2T00059437001 [Brassica napus] (32) | | | | | | | | /----- RrC6417_p1 [Raphanus raphanistrum] (76) | | | \---100---+ | |-59-+ \----- Rsa1.0_01391.1_g00003.1 [Raphanus sativus] (78) | | | /---------100--------+ | |--------------------- Tp3g33170 [Thellungiella parvula] (22) | | | | | | | \--------------------- Thhalv10002026m [Eutrema salsugineum] (30) | | | | | \-------------------------- KFK40348.1 [Arabis alpina] (47) | | | \------------------------------- AA33G00259 [Aethionema arabicum] (12) | | /----- XP_009109049.1 [Brassica rapa] (3) | /-100+ | | \----- XP_013627920.1 [Brassica oleracea] (16) | /-100+ | | | /----- Rsa1.0_00410.1_g00016.1 [Raphanus sativus] (9) | | \-100+ | | \----- RrC21835_p1 [Raphanus raphanistrum] (37) | /-100-+ | | | /----- XP_013595591.1 [Brassica oleracea] (5) | | | /-100+ | | | | \----- XP_009137834.1 [Brassica rapa] (44) | | \-100+ | /-94-+ | /----- RrC268_p5 [Raphanus raphanistrum] (64) | | | \-100+ | | | \----- Rsa1.0_00011.1_g00009.1 [Raphanus sativus] (77) /-100+ /-80-+ | | | | | \--------------------- 676753330 [Sisymbrium irio] (59) | | | | | | | \-------------------------- Tp7g27110 [Thellungiella parvula] (54) | | /-100+ | | | | /----- XP_009128959.1 [Brassica rapa] (25) | | | | /-100+ | | | | | \----- XP_013610124.1 [Brassica oleracea] (86) | | | \---------100--------+ | | /-100+ | /----- Rsa1.0_02425.1_g00001.1 [Raphanus sativus] (51) | | | | \-100+ | | | | \----- RrC2110_p3 [Raphanus raphanistrum] (88) | | | | | | | \------------------------------------ Thhalv10025226m [Eutrema salsugineum] (60) | | | | | | /--------------- Bostr.7867s0764.1.p [Boechera stricta] (17) | | /-100+ | /-100+ | | | | /----- Carubv10007208m [Capsella rubella] (33) | | | | | /-100-+ /-100+ | | | | | | | | \----- Cagra.0495s0060.1.p [Capsella grandiflora] (48) | | | | | | \-100+ | | | | | | | /----- Csa10g013380.1 [Camelina sativa] (49) | | | | \--------100--------+ \-99-+ | | \-100-+ | \----- Csa12g019280.1 [Camelina sativa] (57) | | | | | | | | /----- AT4G29190.1 [Arabidopsis thaliana] (23) | | | \------100------+ | | | \----- 491837 [Arabidopsis lyrata] (58) | | | | | \---------------------------------------------- AA102G00069 [Aethionema arabicum] (34) | | | | /----- XP_010548687.1 [Tarenaya hassleriana] (7) | | | | \------------------------100------------------------+----- XP_010526424.1 [Tarenaya hassleriana] (81) | | | \----- XP_010540993.1 [Tarenaya hassleriana] (83) | | /----- Tp4g05800 [Thellungiella parvula] (4) | /-----------100-----------+ | | \----- 676713788 [Sisymbrium irio] (40) | | | | /----- 481444 [Arabidopsis lyrata] (31) | | /-------95------+ | | | \----- Araha.11061s0001.1.p [Arabidopsis halleri] (68) | | | | | | /----- Cagra.8929s0001.1.p [Capsella grandiflora] (55) | /-95-+ | /-100+ | | | | | \----- Carubv10023740m [Capsella rubella] (67) | | | | /-98-+ | | | /-100+ | | /----- Csa09g092110.1 [Camelina sativa] (65) --87-+ | | | | | \-100+ | | | | |--97-+ \----- Csa16g047520.1 [Camelina sativa] (73) | | | | | | | /-100+ \-73-+ | \--------------- Bostr.26326s0060.1.p [Boechera stricta] (61) | | | | | | | | | \--------------------- AT2G25900.1 [Arabidopsis thaliana] (71) | | | | | | | \-------------------------- Thhalv10002045m [Eutrema salsugineum] (41) | /-100+ | | | | | /----- AA32G01067 [Aethionema arabicum] (70) | | | \--------------100-------------+ | | | \----- KFK32533.1 [Arabis alpina] (79) | | | | | \----------------------------------------- XP_010526073.1 [Tarenaya hassleriana] (84) | | | | /----- Gorai.009G047600.1 [Gossypium raimondii] (8) | | /-92-+ | | | \----- Gh_D05G0463 [Gossypium hirsutum] (63) | | /----100---+ | | | | /----- Cotton_A_30952_BGI-A2_v1.0 [Gossypium arboreum] (62) | /--70-+ | \-100+ | | | | \----- Gh_A05G0346 [Gossypium hirsutum] (75) | | | | | | | | /----- Gh_A07G2288 [Gossypium hirsutum] (13) | | | /-93-+ /-93-+ | | | | | | \----- Cotton_A_05602_BGI-A2_v1.0 [Gossypium arboreum] (19) | | | | | /-100+ | | | | | | | /----- Gh_D07G2410 [Gossypium hirsutum] (43) | | | | | | \-100+ | | | | \--61-+ \----- Gorai.001G024400.1 [Gossypium raimondii] (87) | | | | | | | \--------100--------+ \--------------- Thecc1EG037243t1 [Theobroma cacao] (42) \---100---+ | | | /----- Cotton_A_11892_BGI-A2_v1.0 [Gossypium arboreum] (10) | | /-100+ | | | \----- Gh_A08G2230 [Gossypium hirsutum] (14) | | /-100+ | | | \---------- Gh_D08G2596 [Gossypium hirsutum] (20) | \----100---+ | \--------------- Gorai.004G288300.1 [Gossypium raimondii] (28) | | /---------- EcC007213.10 [Eucalyptus camaldulensis] (38) | | \-------------------100-------------------+ /----- Eucgr.C02990.1.p [Eucalyptus grandis] (52) \-96-+ \----- EcS782740.10 [Eucalyptus camaldulensis] (74) Root part of tree: /------------------------------------------------------------------- Gh_A13G1728 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Cotton_A_03125_BGI-A2_v1.0 [Gossypium arboreum] (69) | | /-------------------------------------- (153) | | | | /----------------------------- evm.model.supercontig_1427.1 [Carica papaya] (6) | /---100---+ | | | | | /---------- orange1.1g016862m [Citrus sinensis] (24) | | \---51---+ /---100--+ | | | | \---------- Ciclev10008633m [Citrus clementina] (56) | | \----76---+ + | \------------------- Eucgr.C03701.1.p [Eucalyptus grandis] (85) | | | | /---------- Gh_D07G0096 [Gossypium hirsutum] (11) | /---100--+ /---98---+ | | | | \---------- Gorai.001G009900.1 [Gossypium raimondii] (27) | | | /--------100-------+ | | | | | /---------- Cotton_A_10312_BGI-A2_v1.0 [Gossypium arboreum] (35) | | | | \---56---+ | | | | \---------- Gh_A07G0087 [Gossypium hirsutum] (50) | | | | | | | | /---------- Gh_A05G0200 [Gossypium hirsutum] (26) | | \----60---+ /---93---+ \---100---+ | | \---------- Cotton_A_09390_BGI-A2_v1.0 [Gossypium arboreum] (39) | | /---100---+ | | | | /---------- Gorai.009G029300.1 [Gossypium raimondii] (46) | | | \---93---+ | \---50---+ \---------- Gh_D05G0276 [Gossypium hirsutum] (82) | | | \----------------------------- Thecc1EG037730t1 [Theobroma cacao] (66) | | /---------- Gh_D13G2076 [Gossypium hirsutum] (29) \----------------------100---------------------+ \---------- Gorai.013G229000.1 [Gossypium raimondii] (45) |