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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1220
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 180: /----- Cotton_A_21627_BGI-A2_v1.0 [Gossypium arboreum] (2) /-100+ | \----- Gh_A09G1326 [Gossypium hirsutum] (23) /------------------------100-----------------------+ | | /----- Gorai.006G152400.1 [Gossypium raimondii] (63) | \-100+ | \----- Gh_D09G1287 [Gossypium hirsutum] (74) | | /----- AT3G11580.1 [Arabidopsis thaliana] (3) | /------83------+ | | \----- 897360 [Arabidopsis lyrata] (68) | | | | /----- Csa01g012670.1 [Camelina sativa] (6) | | | | /---100---+ /-100+----- Csa19g015730.1 [Camelina sativa] (78) | | | | | | | | /-95-+ \----- Csa15g015410.1 [Camelina sativa] (95) | | | | | | | | | \---------- Bostr.19424s1090.1.p [Boechera stricta] (43) | | \-99-+ | | | /----- Carubv10014376m [Capsella rubella] (51) | | \---100---+ | | \----- Cagra.1655s0012.1.p [Capsella grandiflora] (84) | | | | /----- XP_009146703.1 [Brassica rapa] (9) | | /-100+ | | | \----- GSBRNA2T00000286001 [Brassica napus] (76) | | /-100+ | | | | /----- GSBRNA2T00111064001 [Brassica napus] (10) | | | \-100+ | | /-100+ \----- XP_013638984.1 [Brassica oleracea] (83) | | | | | | | | /----- RrC3296_p1 [Raphanus raphanistrum] (15) | | | \---100---+ | | | \----- Rsa1.0_05361.1_g00003.1 [Raphanus sativus] (47) | /-100-+ /-99-+ | | | | | /----- RrC19558_p1 [Raphanus raphanistrum] (30) | | | | | /-100+ | | | | | | \----- Rsa1.0_00179.1_g00035.1 [Raphanus sativus] (45) | | | | \----99---+ | | |-68-+ | /----- XP_013622680.1 [Brassica oleracea] (39) | | | | \-100+ | | | | \----- GSBRNA2T00111579001 [Brassica napus] (90) | | | | | | | \------------------------- Tp3g09820 [Thellungiella parvula] (97) | | | | | | /----- GSBRNA2T00036312001 [Brassica napus] (26) | /-100+ | /-100+ | | | | | \----- XP_009124885.1 [Brassica rapa] (70) | | | | /-56-+ | | | | | \---------- XP_013621203.1 [Brassica oleracea] (67) | | | |------100-----+ | | | | | /----- RrC3493_p1 [Raphanus raphanistrum] (65) | | | | \---100---+ | | | | \----- Rsa1.0_02593.1_g00005.1 [Raphanus sativus] (73) | | | | | | | \------------------------------ Thhalv10021305m [Eutrema salsugineum] (36) | | | | | \------------------------------------ AA52G00027 [Aethionema arabicum] (56) | | | | /----- AA119G00002 [Aethionema arabicum] (14) | | /----80---+ | | | \----- Tp6g36630 [Thellungiella parvula] (93) | | | | | /-79-+ /----- Rsa1.0_06206.1_g00001.1 [Raphanus sativus] (40) | | | | /-100+ | | | | | \----- RrC17675_p1 [Raphanus raphanistrum] (64) | | | \-99-+ | | | \---------- 676732614 [Sisymbrium irio] (55) | | | | | /-82-+ /----- GSBRNA2T00096275001 [Brassica napus] (18) | | | | /-100+ | | | | | \----- GSBRNA2T00107017001 [Brassica napus] (87) | | | | /-100+ | | | | | \---------- XP_009122224.1 [Brassica rapa] (98) | | | \-100+ | | /-82-+ \--------------- XP_013609500.1 [Brassica oleracea] (19) | | | | | | | | /----- Rsa1.0_00940.1_g00011.1 [Raphanus sativus] (28) | | | | /---100---+ | /-89-+ | | | \----- RrC1029_p2 [Raphanus raphanistrum] (86) | | | | | | | | | | \---100---+ /----- XP_013628241.1 [Brassica oleracea] (41) --99-+ | | /--68-+ | /-100+ | | | | | | | \----- GSBRNA2T00134427001 [Brassica napus] (77) | | | | | \-100+ | | | | | | /----- GSBRNA2T00086985001 [Brassica napus] (69) | | | | | \-100+ | | | | | \----- XP_009130926.1 [Brassica rapa] (92) | | | | | | | | | \------------------------------ Thhalv10015675m [Eutrema salsugineum] (62) | | | | | | | | /----- Araha.4200s0011.1.p [Arabidopsis halleri] (22) | | | | /-100+ | | | | | \----- 487432 [Arabidopsis lyrata] (32) | | | | /-100+ | | | | | \---------- AT5G06250.2 [Arabidopsis thaliana] (44) | | |-95-+ /-100+ | | | | | \--------------- Bostr.13129s0349.1.p [Boechera stricta] (29) | | | | | | | | | | /----- Cagra.2117s0038.1.p [Capsella grandiflora] (25) | | | |------100------+ /---100---+ | | | | | | \----- Carubv10001689m [Capsella rubella] (35) | | | | | | | | | | \-100+ /----- Csa13g008230.1 [Camelina sativa] (38) | | | | | /-83-+ | | | | | | \----- Csa08g058280.1 [Camelina sativa] (72) | | | | \-100+ | | | | \---------- Csa20g008460.1 [Camelina sativa] (81) | | | | | | | \------------------------------------ KFK25025.1 [Arabis alpina] (49) | | | | | | /----- XP_010543925.1 [Tarenaya hassleriana] (34) | | \-----------------98----------------+ | | \----- XP_010558919.1 [Tarenaya hassleriana] (85) | | | | /----- Csa04g049540.1 [Camelina sativa] (4) | | | | | /-100+----- Csa06g038670.1 [Camelina sativa] (80) | | | | | /-66-+ | \----- Csa05g018030.1 [Camelina sativa] (91) | | | /-99-+ | | | | | /----- Carubv10023925m [Capsella rubella] (13) | | | | \-100+ | | | /-100+ \----- Cagra.0993s0119.1.p [Capsella grandiflora] (31) | | | | | | | | | \--------------- Bostr.23794s0488.1.p [Boechera stricta] (61) | | | /-85-+ | | | | | /----- AT2G36080.1 [Arabidopsis thaliana] (48) | | | | \------88------+ | | | | \----- 902720 [Arabidopsis lyrata] (66) | | | | | | | |------------------------- Tp4g18310 [Thellungiella parvula] (7) | | | | | | | | /----- XP_009143617.1 [Brassica rapa] (11) | | | | /-100+ | | | | | \----- GSBRNA2T00117107001 [Brassica napus] (27) | | | | /-99-+ | | | | | | /----- GSBRNA2T00141192001 [Brassica napus] (42) | | | | | \-100+ | | | | /-100+ \----- XP_013634346.1 [Brassica oleracea] (53) | | | | | | | | | | | | /----- Rsa1.0_00672.1_g00002.1 [Raphanus sativus] (24) | | | |-65-+ \---100---+ | | | /-82-+ | \----- RrC21563_p1 [Raphanus raphanistrum] (58) | /-98-+ | | | | | | | | | | \-------------------- 676787882 [Sisymbrium irio] (60) | | | | | | | | | | | | /----- GSBRNA2T00077247001 [Brassica napus] (21) | | | | | | /-94-+ | | | | | | | \----- XP_009141558.1 [Brassica rapa] (100) | | | | | | /-70-+ | | | | | | | \---------- XP_013614625.1 [Brassica oleracea] (96) | | | | /-100-+ | /-100+ | | | | | | | | | /----- Rsa1.0_00308.1_g00009.1 [Raphanus sativus] (37) | | | | | | | | \---100---+ | | | | | | |-54-+ \----- RrC30704_p1 [Raphanus raphanistrum] (71) | | | | | | | | | | | | | | | \-------------------- AA60G00186 [Aethionema arabicum] (88) | | | \---100---+ | | | | | | | \------------------------- KFK36503.1 [Arabis alpina] (50) | | | | | \-100+ | | \------------------------------ Thhalv10017156m [Eutrema salsugineum] (8) | | | | | \------------------------------------ XP_010553392.1 [Tarenaya hassleriana] (12) | | | | /---------- EcC039386.10 [Eucalyptus camaldulensis] (33) | | | | | /-64-+ /----- EcC005481.10 [Eucalyptus camaldulensis] (57) | | | \-70-+ | \----------------100----------------+ \----- Eucgr.A02625.1.p [Eucalyptus grandis] (75) | | | \--------------- EcC050706.10 [Eucalyptus camaldulensis] (46) | | /----- Ciclev10012008m [Citrus clementina] (5) | /-100+ | | \----- orange1.1g019261m [Citrus sinensis] (17) | /-100+ | | \---------- Neem_9880_f_1 [Azadirachta indica] (20) \-------------------100------------------+ \--------------- evm.TU.contig_29173.1 [Carica papaya] (89) Root part of tree: /------------------------------------------------------------------ Gorai.002G237900.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------ Gh_D01G2375 [Gossypium hirsutum] (59) | | /-------------------------------------------- (180) | | | | /----------- Cotton_A_40609_BGI-A2_v1.0 [Gossypium arboreum] (16) + | /----100---+ | /----100---+ | \----------- Gh_A04G1385 [Gossypium hirsutum] (54) | | | /----100---+ | | | | | /----------- Gh_D04G0927 [Gossypium hirsutum] (79) | | | | \----91----+ | | \----88----+ \----------- Gorai.009G399000.1 [Gossypium raimondii] (82) \----94----+ | | \--------------------------------- Thecc1EG022729t1 [Theobroma cacao] (94) | | /----------- Gh_A01G1745 [Gossypium hirsutum] (52) \--------------------100--------------------+ \----------- Cotton_A_10166_BGI-A2_v1.0 [Gossypium arboreum] (99) |