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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1211
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 165: /---------- Csa20g067060.1 [Camelina sativa] (3) | /-100+ /----- Csa18g010690.1 [Camelina sativa] (30) | \-57-+ | \----- Csa11g071780.1 [Camelina sativa] (55) /-100-+ | | /----- Carubv10027543m [Capsella rubella] (60) | \---100---+ /-76-+ \----- Cagra.1103s0008.1.p [Capsella grandiflora] (76) | | | \--------------------- Bostr.3148s0159.1.p [Boechera stricta] (40) /-100+ | | /----- AT5G43170.1 [Arabidopsis thaliana] (29) | \---------100--------+ /-72-+ \----- 917368 [Arabidopsis lyrata] (78) | | | \------------------------------- KFK31733.1 [Arabis alpina] (64) | /------------93-----------+ /--------------- Tp2g07950 [Thellungiella parvula] (26) | | | | | | /----- XP_013595850.1 [Brassica oleracea] (43) | \---------100--------+ /-100+ | | | \----- GSBRNA2T00046227001 [Brassica napus] (74) | | | | \-100+---------- XP_009101805.1 [Brassica rapa] (67) | | | \---------- GSBRNA2T00018843001 [Brassica napus] (68) | | /----- Gh_A12G0173 [Gossypium hirsutum] (6) | /-100+ | | \----- Cotton_A_24596_BGI-A2_v1.0 [Gossypium arboreum] (39) | /-97-+ | | \---------- Gh_D12G0176 [Gossypium hirsutum] (70) | /-100-+ | | \--------------- Gorai.008G020700.1 [Gossypium raimondii] (91) | | | /-98-+ /--------------- Gorai.005G232300.1 [Gossypium raimondii] (13) | | | | | | | | /----- Gh_A03G1611 [Gossypium hirsutum] (37) | | \-100-+ /-97-+ | /-97-+ | | \----- Cotton_A_21716_BGI-A2_v1.0 [Gossypium arboreum] (75) | | | \-78-+ | | | \---------- Gh_D02G2025 [Gossypium hirsutum] (83) | | | | | \-------------------------- Thecc1EG007214t1 [Theobroma cacao] (42) | /-100+ | | | /----- Gorai.013G050100.1 [Gossypium raimondii] (57) | | | /-89-+ | | | | \----- Gh_D13G0451 [Gossypium hirsutum] (88) | | \---------100--------+ | | | /----- Cotton_A_27118_BGI-A2_v1.0 [Gossypium arboreum] (66) | | \-95-+ | /---100---+ \----- Gh_A13G2112 [Gossypium hirsutum] (86) | | | | | | /---------- Neem_14676_f_1 [Azadirachta indica] (41) | | | | | | | /-100+ /----- orange1.1g024499m [Citrus sinensis] (61) | | | | \-100+ --100+ | | | \----- Ciclev10029065m [Citrus clementina] (62) | | \---------59---------+ | | | /----- EcC048906.10 [Eucalyptus camaldulensis] (52) | | \---100---+ | | \----- Eucgr.G01247.1.p [Eucalyptus grandis] (90) | | | | /---------- Cotton_A_14847_BGI-A2_v1.0 [Gossypium arboreum] (10) | | | | | /-100+ /----- Gorai.010G025200.1 [Gossypium raimondii] (38) | | | \-100+ | | | \----- Gh_D06G2303 [Gossypium hirsutum] (58) | | /-100-+ | | | | /---------- Cotton_A_20732_BGI-A2_v1.0 [Gossypium arboreum] (20) | | | | | | | | \-100+ /----- Gh_D01G1033 [Gossypium hirsutum] (27) | | | \-99-+ | /-100-+ | \----- Gorai.002G132600.1 [Gossypium raimondii] (94) | | | | | | | /-100+ /----- Gh_A05G1815 [Gossypium hirsutum] (33) | | | | | /-100+ | | | | | | \----- Cotton_A_23497_BGI-A2_v1.0 [Gossypium arboreum] (84) | | | | | /-100+ | | | | | | | /----- Gh_D05G2011 [Gossypium hirsutum] (79) | | | | | | \-99-+ | | | /-100+ \-100-+ \----- Gorai.009G218900.1 [Gossypium raimondii] (80) | | | | | | | | | | | | /----- Gh_A02G0836 [Gossypium hirsutum] (44) | | | | | \---100---+ | | | /-63-+ | \----- Cotton_A_10916_BGI-A2_v1.0 [Gossypium arboreum] (53) | | | | | | | | | | | \-------------------------- Thecc1EG034720t1 [Theobroma cacao] (95) | /-100+ | | | | | | | | \------------------------------- Eucgr.F02262.1.p [Eucalyptus grandis] (81) | | | | /-100+ | | | | | | /----- Ciclev10002297m [Citrus clementina] (11) | | | | | | /-100+ | | | | | | | \----- orange1.1g038669m [Citrus sinensis] (63) | | | \-84-+ \-----------100-----------+ | | | | \---------- Neem_38_f_3 [Azadirachta indica] (19) | | | | \-76-+ | | /----- evm.model.supercontig_249.7 [Carica papaya] (18) | | \-----------------89----------------+ | | \----- XP_010556440.1 [Tarenaya hassleriana] (21) | | | | /----- XP_010538141.1 [Tarenaya hassleriana] (65) | \----------------------98----------------------+ | \----- XP_010549267.1 [Tarenaya hassleriana] (93) | \--------------------------------------------------------- AA3G00256 [Aethionema arabicum] (36) Subtree rooted at node 182: /----- GSBRNA2T00003129001 [Brassica napus] (2) /-100+ | \----- XP_013607245.1 [Brassica oleracea] (31) /-98-+ | | /----- XP_009122614.1 [Brassica rapa] (51) | \-100+ /-100-+ \----- GSBRNA2T00136367001 [Brassica napus] (54) | | | | /----- RrC203_p1 [Raphanus raphanistrum] (45) /-72-+ \---100---+ | | \----- Rsa1.0_00465.1_g00007.1 [Raphanus sativus] (85) | | | \--------------------- 676718104 [Sisymbrium irio] (56) | /-98-+ /----- Tp6g38390 [Thellungiella parvula] (28) | |---------64---------+ | | \----- Thhalv10014546m [Eutrema salsugineum] (77) | | | \-------------------------- KFK24883.1 [Arabis alpina] (59) | | /----- AT5G04340.1 [Arabidopsis thaliana] (16) /-100+ /---------98---------+ | | | \----- 908317 [Arabidopsis lyrata] (73) | | | | | | /---------- Csa13g006350.1 [Camelina sativa] (23) | | | | | | | /-100+ /----- Csa20g005540.1 [Camelina sativa] (71) | \-57-+ | \-100+ | | | \----- Csa08g060140.1 [Camelina sativa] (82) /-99-+ | /-100-+ | | | | | /----- Cagra.9217s0012.1.p [Capsella grandiflora] (49) | | | | \---100---+ | | \-100+ \----- Carubv10001868m [Capsella rubella] (50) | | | /-95-+ | \--------------------- Bostr.2128s0015.1.p [Boechera stricta] (92) | | | | | \------------------------------------ (165) | | | \----------------------------------------- KFK44656.1 [Arabis alpina] (24) | | /----- Csa03g030980.1 [Camelina sativa] (4) | | /--99-+ /-94-+----- Csa14g035300.1 [Camelina sativa] (17) | | | | | | | \----- Csa17g037510.1 [Camelina sativa] (48) | | | | | /-67-+---------- Bostr.15697s0099.1.p [Boechera stricta] (9) | | | | | | | | /----- Carubv10010130m [Capsella rubella] (69) | | | \-100+ | \--------------86--------------+ \----- Cagra.1822s0082.1.p [Capsella grandiflora] (72) /-93-+ | | | | /---------- AT1G27730.1 [Arabidopsis thaliana] (46) | | | | | | \-100+ /----- Araha.9655s0001.1.p [Arabidopsis halleri] (47) | | \-74-+ | | \----- 472978 [Arabidopsis lyrata] (89) /-68-+ | | | | /----- GSBRNA2T00117455001 [Brassica napus] (7) | | \----------------------100---------------------+ | | \----- XP_013596068.1 [Brassica oleracea] (34) | | | \--------------------------------------------------------- Thhalv10010032m [Eutrema salsugineum] (22) | --100+ /----- XP_013623412.1 [Brassica oleracea] (5) | /-100+ | | \----- GSBRNA2T00049994001 [Brassica napus] (96) | /-95-+ | | | /----- GSBRNA2T00150622001 [Brassica napus] (8) | | \-100+ \----------------------100---------------------+ \----- XP_009109781.1 [Brassica rapa] (97) | \--------------- RrC469_p4 [Raphanus raphanistrum] (15) Root part of tree: /------------------------------------------------------------------- Rsa1.0_06543.1_g00001.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC13861_p1 [Raphanus raphanistrum] (35) | | /----------------- (182) + /------100------+ | | \----------------- Tp1g23960 [Thellungiella parvula] (87) | /-------100------+ | | \--------------------------------- 676777800 [Sisymbrium irio] (14) | | \-------100------+ /----------------- GSBRNA2T00038383001 [Brassica napus] (12) | /-------97------+ | | \----------------- XP_009113736.1 [Brassica rapa] (25) \-------96-------+ | /----------------- XP_013637900.1 [Brassica oleracea] (32) \------100------+ \----------------- GSBRNA2T00142236001 [Brassica napus] (98) |