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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1141
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 172: /---------- Gorai.010G203800.1 [Gossypium raimondii] (2) | |---------- Gh_D06G1825 [Gossypium hirsutum] (6) /------100-----+ | | /----- Cotton_A_26179_BGI-A2_v1.0 [Gossypium arboreum] (9) | \-99-+ | \----- Gh_A06G1941 [Gossypium hirsutum] (62) | | /----- Cotton_A_29937_BGI-A2_v1.0 [Gossypium arboreum] (8) /-100+ /---100---+ | | | \----- Gh_A05G3659 [Gossypium hirsutum] (89) | | | | | /-100+ /----- Gh_D04G1971 [Gossypium hirsutum] (12) | | | | /-98-+ | | | | | \----- Gh_D04G0807 [Gossypium hirsutum] (79) /--60-+ \-93-+ \-100+ | | | \---------- Gorai.012G094200.1 [Gossypium raimondii] (41) | | | | | \-------------------- Thecc1EG043081t1 [Theobroma cacao] (63) | | | \------------------------------ evm.model.supercontig_53.26 [Carica papaya] (13) | | /----- orange1.1g026556m [Citrus sinensis] (7) /-55-+ /---100---+ | | | \----- Ciclev10033956m [Citrus clementina] (37) | | | | | /-66-+ /---------- Ciclev10032782m [Citrus clementina] (85) | | | | | | | | \-100+ /----- Ciclev10006694m [Citrus clementina] (97) | | | \-100+ | | | \----- orange1.1g047804m [Citrus sinensis] (120) | \-------51------+ | | /----- Eucgr.J01123.1.p [Eucalyptus grandis] (23) /-71-+ | /-100+ | | | | \----- EcC047406.40 [Eucalyptus camaldulensis] (66) | | \----78---+ | | \---------- Neem_11875_f_4 [Azadirachta indica] (60) | | | | /----- Ciclev10032772m [Citrus clementina] (45) | | /-100+ | | | \----- orange1.1g045080m [Citrus sinensis] (83) | | /-95-+ | | | \---------- Neem_11875_f_3 [Azadirachta indica] (80) | \------------53-----------+ | \--------------- EcC064765.10 [Eucalyptus camaldulensis] (93) | | /----- Ciclev10029283m [Citrus clementina] (10) | /-100+ | | \----- orange1.1g047491m [Citrus sinensis] (19) | | | | /----- Neem_21486_f_1 [Azadirachta indica] (54) |-----------------54----------------+-100+ | | \----- Neem_9985_f_1 [Azadirachta indica] (76) | | | \---------- evm.TU.contig_40341.1 [Carica papaya] (100) | | /----- Gh_D08G0122 [Gossypium hirsutum] (17) | /-95-+ | | \----- Gorai.004G012800.1 [Gossypium raimondii] (68) | /-100+ | | | /----- Gh_A08G0081 [Gossypium hirsutum] (67) | | \-99-+ | /-95-+ \----- Cotton_A_11954_BGI-A2_v1.0 [Gossypium arboreum] (78) | | | /-99-+ | \--------------- Thecc1EG041094t1 [Theobroma cacao] (50) | | | | | /-95-+ /----- Gh_A13G0015 [Gossypium hirsutum] (18) | | | | /-100+ | | | | | \----- Cotton_A_20528_BGI-A2_v1.0 [Gossypium arboreum] (99) | | | \---100---+ | | | | /----- Gorai.013G002900.1 [Gossypium raimondii] (57) | | | \-100+ | | /-90-+ \----- Gh_D13G0031 [Gossypium hirsutum] (88) | | | | | | | | /----- Gh_A07G1059 [Gossypium hirsutum] (42) | | | | /-93-+ | | | | | \----- Cotton_A_13320_BGI-A2_v1.0 [Gossypium arboreum] (95) | | | \------100-----+ | | | | /----- Gorai.001G129700.1 [Gossypium raimondii] (51) | |-------92------+ \-100+ /-60-+ | | \----- Gh_D07G1151 [Gossypium hirsutum] (94) | | | | | | | | /----- Gh_D09G1008 [Gossypium hirsutum] (31) | | | | /-100+ | | | | | \----- Gorai.006G120900.1 [Gossypium raimondii] (75) | | | | | | | | \--------100--------+---------- Cotton_A_01732_BGI-A2_v1.0 [Gossypium arboreum] (32) | | | | | | | \---------- Gh_A09G0988 [Gossypium hirsutum] (110) | | | /-99-+ | | /----- EcC003387.10 [Eucalyptus camaldulensis] (25) | | | |-------------------100------------------+ | | | | \----- EcS720455.10 [Eucalyptus camaldulensis] (140) | | | | | | | \---------------------------------------------- Eucgr.B02465.1.p [Eucalyptus grandis] (52) | | | | | \--------------------------------------------------- XP_010521775.1 [Tarenaya hassleriana] (27) | | | | /----- XP_010542601.1 [Tarenaya hassleriana] (39) | \------------------------100-----------------------+ | \----- XP_010557308.1 [Tarenaya hassleriana] (150) | | /----- Carubv10010390m [Capsella rubella] (3) | /---100---+ | | \----- Cagra.1671s0410.1.p [Capsella grandiflora] (58) | | | /-82-+ /----- Csa03g011350.1 [Camelina sativa] (38) | | | /-96-+ | | | | \----- Csa14g009330.1 [Camelina sativa] (86) | /-89-+ \-100+ --97-+ | | \---------- Csa17g011330.1 [Camelina sativa] (61) | | | | | \-------------------- Bostr.25219s0157.1.p [Boechera stricta] (65) | /---------99---------+ | | | /---------- AT1G07900.1 [Arabidopsis thaliana] (26) | | | | | | \------100-----+ /----- 311843 [Arabidopsis lyrata] (33) | | \-100+ | | \----- Araha.22931s0001.1.p [Arabidopsis halleri] (90) | | | | /----- Rsa1.0_00832.1_g00013.1 [Raphanus sativus] (5) | | /----99---+ | | | \----- RrC41_p5 [Raphanus raphanistrum] (15) | | | | | /------100-----+ /----- GSBRNA2T00156289001 [Brassica napus] (22) | | | | /-97-+ | | | | | \----- XP_009148039.1 [Brassica rapa] (35) | | | \-100+ | | | | /----- GSBRNA2T00100652001 [Brassica napus] (34) \------100-----+ | \-100+ | | \----- XP_013584488.1 [Brassica oleracea] (43) | | | /--90-+ /-------------------- Tp1g06580 [Thellungiella parvula] (11) | | | | | | | | /----- GSBRNA2T00122208001 [Brassica napus] (21) | | | | /-100+ | | | /-92-+ | \----- XP_009118406.1 [Brassica rapa] (29) | | | | | /-95-+ | | | | | | | /----- XP_013603026.1 [Brassica oleracea] (55) | /-75-+ | | | | \-100+ | | | \-100+ \-100+ \----- GSBRNA2T00019386001 [Brassica napus] (84) | | | | | | | | | \--------------- Rsa1.0_00566.1_g00002.1 [Raphanus sativus] (74) | | | | \-100+ | \------------------------- 676738286 [Sisymbrium irio] (16) | | | \------------------------------------ KFK43106.1 [Arabis alpina] (24) | \----------------------------------------- Thhalv10008781m [Eutrema salsugineum] (53) Root part of tree: /------------------------------------------------------------------ Carubv10023989m [Capsella rubella] (1) | |------------------------------------------------------------------ Cagra.9128s0007.1.p [Capsella grandiflora] (14) | | /-------- (172) | /--100--+ | | \-------- AA32G00863 [Aethionema arabicum] (72) | /---------------97---------------+ | | \---------------- KFK32292.1 [Arabis alpina] (77) | | | | /-------- XP_013634217.1 [Brassica oleracea] (4) | | /--100--+ | | | \-------- GSBRNA2T00127818001 [Brassica napus] (20) | | /---76---+ | | | | /-------- GSBRNA2T00036294001 [Brassica napus] (40) | | | \--100--+ | | | \-------- XP_009140905.1 [Brassica rapa] (98) | | /---80--+ | | | | /-------- GSBRNA2T00138844001 [Brassica napus] (30) | | | | /---99--+ | | | | | \-------- XP_009133875.1 [Brassica rapa] (64) + /---100--+ | \---100--+ | | | /---84--+ | /-------- GSBRNA2T00047337001 [Brassica napus] (49) | | | | | \---83--+ | | | | | \-------- XP_013627119.1 [Brassica oleracea] (73) | | | | | | | | | | /-------- RrC363_p1 [Raphanus raphanistrum] (71) | | | | \-----------100----------+ | | | | \-------- Rsa1.0_00076.1_g00020.1 [Raphanus sativus] (130) | | | | | | | | /-------- GSBRNA2T00118760001 [Brassica napus] (28) | | | | /--100--+ | | | | | \-------- XP_009103694.1 [Brassica rapa] (36) | | | | /---99---+ | | \--100--+ | | /-------- XP_013614548.1 [Brassica oleracea] (59) | | | | \---99--+ | | |------100------+ \-------- GSBRNA2T00089998001 [Brassica napus] (70) | | | | | | | | /-------- Rsa1.0_01063.1_g00007.1 [Raphanus sativus] (44) | | | \-------100------+ | | | \-------- RrC6925_p1 [Raphanus raphanistrum] (47) \--100--+ | | |----------------------------------------- 676725000 [Sisymbrium irio] (69) | | | |----------------------------------------- Thhalv10017165m [Eutrema salsugineum] (87) | | | \----------------------------------------- Tp4g11330 [Thellungiella parvula] (91) | | /-------- Csa16g016650.1 [Camelina sativa] (46) | /---99--+ | | \-------- Csa05g038110.1 [Camelina sativa] (56) |--------------------99-------------------+ | \---------------- Csa07g016050.1 [Camelina sativa] (96) | | /-------- Araha.12478s0004.1.p [Arabidopsis halleri] (48) | /--100--+ | | \-------- 481760 [Arabidopsis lyrata] (82) |--------------------98-------------------+ | \---------------- AT2G28500.1 [Arabidopsis thaliana] (81) | \---------------------------------------------------------- Bostr.27991s0074.1.p [Boechera stricta] (92) |