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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1128
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 132: /------------------------------------------------------------- Eucgr.K00234.1.p [Eucalyptus grandis] (2) | | /------------------------- evm.model.supercontig_107.25 [Carica papaya] (3) | | | | /----- Gh_A08G2453 [Gossypium hirsutum] (9) | | /-100+ | | | \----- Cotton_A_32389_BGI-A2_v1.0 [Gossypium arboreum] (94) | /------------96-----------+ /---100---+ | | | | \---------- Gorai.004G120700.1 [Gossypium raimondii] (46) | | | | | | | | /----- Gh_A09G0391 [Gossypium hirsutum] (13) | | | | /-100+ | | \-100+ | \----- Cotton_A_38798_BGI-A2_v1.0 [Gossypium arboreum] (30) | | | /-100+ | | | | | /----- Gh_Sca007830G01 [Gossypium hirsutum] (67) | | | | \-100+ | | \-88-+ \----- Gorai.006G047300.1 [Gossypium raimondii] (120) | | | | | \--------------- Thecc1EG015114t1 [Theobroma cacao] (54) | | | | /-------------------- 676769310 [Sisymbrium irio] (4) --100+ | | | | | /--------------- Rsa1.0_01567.1_g00002.1 [Raphanus sativus] (41) | | /-100+ | | | | | | /----- GSBRNA2T00050672001 [Brassica napus] (83) | | | \-100+ /-100+ | | | | | \----- XP_013613235.1 [Brassica oleracea] (98) | /-94-+ | \-100+ | | | /-100+ | /----- GSBRNA2T00110242001 [Brassica napus] (88) | | | | | \-100+ | | | | | \----- XP_009106897.1 [Brassica rapa] (100) | | | /-100-+ | | | | | | \------------------------- Tp6g14420 [Thellungiella parvula] (38) | | | | | | | | | \------------------------------ Thhalv10015677m [Eutrema salsugineum] (17) | | | | | | | | /----- Carubv10028346m [Capsella rubella] (33) | | | /-100+ /---100---+ | | | | | | \----- Cagra.0094s0026.1.p [Capsella grandiflora] (37) | | | | | | | | | | | /-100+ /----- Csa02g045180.1 [Camelina sativa] (39) \-97-+ | | | | | /-100+ | | | | | | | \----- Csa11g083840.1 [Camelina sativa] (48) | | /-100+ \------100------+ \-100+ | | | | | \---------- Csa18g023060.1 [Camelina sativa] (68) | | | | | | | | | \-------------------- Araha.33550s0002.1.p [Arabidopsis halleri] (44) | \-100+ | | | \----------------------------------------- AA55G00037 [Aethionema arabicum] (35) | | | | /----- XP_010537197.1 [Tarenaya hassleriana] (27) | \-------------------100------------------+ | \----- XP_010555654.1 [Tarenaya hassleriana] (61) | | /----- Ciclev10004453m [Citrus clementina] (77) \------------------------100-----------------------+ \----- orange1.1g003954m [Citrus sinensis] (87) Subtree rooted at node 174: /------------------------------ (132) | | /----- Cotton_A_03394_BGI-A2_v1.0 [Gossypium arboreum] (5) | /-99-+ | | \----- Gh_A12G2601 [Gossypium hirsutum] (79) | /-100+ | | | /----- Gh_D12G1049 [Gossypium hirsutum] (97) | | \-100+ | | \----- Gorai.008G117200.1 [Gossypium raimondii] (130) | /-53-+ | | | /----- Cotton_A_32341_BGI-A2_v1.0 [Gossypium arboreum] (36) | | | /-100+ /--93-+ | | | \----- Gh_A11G0777 [Gossypium hirsutum] (78) | | | \-100+ | | | | /----- Gorai.007G096000.1 [Gossypium raimondii] (42) | | | \-100+ | | /-57-+ \----- Gh_D11G0906 [Gossypium hirsutum] (56) | | | | | | | |-------------------- Thecc1EG005412t1 [Theobroma cacao] (32) | | | | | | | | /----- Gh_D07G1441 [Gossypium hirsutum] (49) | | | | /-100+ | | | | | \----- Gorai.001G171000.1 [Gossypium raimondii] (58) /-93-+ | | \---100---+ | | \-54-+ | /----- Cotton_A_24123_BGI-A2_v1.0 [Gossypium arboreum] (73) | | | \-100+ | | | \----- Gh_A07G1332 [Gossypium hirsutum] (82) | | | | | | /----- Ciclev10018855m [Citrus clementina] (16) | | | /-100+ /--------100--------+ | | | \----- orange1.1g002869m [Citrus sinensis] (75) | | | \------100-----+ | | | \---------- Neem_544_f_1 [Azadirachta indica] (71) | | | | | \------------------------------------ evm.model.supercontig_18.215 [Carica papaya] (53) | | | \----------------------------------------- Eucgr.D02248.1.p [Eucalyptus grandis] (7) | | /----------------------------------------- Thhalv10028440m [Eutrema salsugineum] (6) | | | | /----- Rsa1.0_00187.1_g00007.1 [Raphanus sativus] (10) | | /---100---+ | | | \----- RrC450_p2 [Raphanus raphanistrum] (90) | | | | | /-100+ /----- XP_013629750.1 [Brassica oleracea] (19) | | | | /-100+ | | | | | \----- GSBRNA2T00153520001 [Brassica napus] (45) | | | \-100+ | | | | /----- GSBRNA2T00112150001 [Brassica napus] (62) | | | \-100+ | | | \----- XP_009134533.1 [Brassica rapa] (96) | /-91-+ /-51-+ | | | | | /----- XP_009111469.1 [Brassica rapa] (31) | | | | | /-100+ | | | | | | \----- GSBRNA2T00098329001 [Brassica napus] (74) --100+ | | | | /-100+ | | | | | | | /----- GSBRNA2T00123560001 [Brassica napus] (47) | | | /-61-+ | | \-100+ | | | | | \-100+ \----- XP_013612299.1 [Brassica oleracea] (140) | | | | | | | | | | | \--------------- RrC3092_p1 [Raphanus raphanistrum] (95) | | | /--74-+ | | | | | | \------------------------- 676743386 [Sisymbrium irio] (21) | | | | | | /-100+ \-81-+ \------------------------------ Tp6g00710 [Thellungiella parvula] (93) | | | | | | | \------------------------------------ KFK30661.1 [Arabis alpina] (52) | | | | | | /----- Carubv10000257m [Capsella rubella] (12) | | | /------100-----+ | | | | \----- Cagra.6594s0010.1.p [Capsella grandiflora] (50) | | | | | | | | /----- Csa08g001850.1 [Camelina sativa] (23) | | | /-100+ /-100+ | /-100+ | | | | \----- Csa13g056690.1 [Camelina sativa] (34) | | | | | | /-100+ | | | | | | | \---------- Csa02g001790.1 [Camelina sativa] (66) | | | \---------100--------+ \-99-+ | | | | \--------------- Bostr.10064s0036.1.p [Boechera stricta] (29) | | | | \-100+ | | /----- AT4G00730.1 [Arabidopsis thaliana] (43) | | \---------99--------+ | | \----- Araha.19926s0004.1.p [Arabidopsis halleri] (63) | | | \--------------------------------------------------- AA32G00026 [Aethionema arabicum] (84) | \-------------------------------------------------------- XP_010523042.1 [Tarenaya hassleriana] (110) Subtree rooted at node 200: /---------- (174) | /----------------100----------------+ /----- XP_010544689.1 [Tarenaya hassleriana] (24) | \-100+ | \----- XP_010523728.1 [Tarenaya hassleriana] (91) | | /------------------------- Thhalv10001317m [Eutrema salsugineum] (8) | | | | /----- XP_013637556.1 [Brassica oleracea] (15) | | /-100+ | | | \----- GSBRNA2T00006095001 [Brassica napus] (86) | /-100+ /-100+ | | | | | /----- XP_009143166.1 [Brassica rapa] (59) | | | | \-100+ | | | /-100+ \----- GSBRNA2T00116732001 [Brassica napus] (72) /-100+ | | | | | | | \-100+ \--------------- 676734570 [Sisymbrium irio] (64) | | /-100-+ | | | | | \-------------------- Tp4g27810 [Thellungiella parvula] (76) | | | | | | | | /--------------- Bostr.25993s0196.1.p [Boechera stricta] (20) | | | | | | | | | | /----- Cagra.0050s0122.1.p [Capsella grandiflora] (55) | | /-100+ \------100-----+ /-100+ | | | | | | \----- Carubv10022677m [Capsella rubella] (60) | | | | \-100+ | | | | \---------- Csa05g003480.1 [Camelina sativa] (69) | \-100+ | /-93-+ | \------------------------------------ KFK37365.1 [Arabis alpina] (14) | | | | | \----------------------------------------- AA21G00315 [Aethionema arabicum] (57) | | | | /---------- AT3G61150.1 [Arabidopsis thaliana] (11) | | | | | /------100-----+ /----- Araha.3868s0004.1.p [Arabidopsis halleri] (85) | | | \-100+ | | | \----- 324546 [Arabidopsis lyrata] (150) | | | | | | /----- Cagra.3373s0039.1.p [Capsella grandiflora] (18) /-100+ | | /---100---+ | | \-----------100-----------+ | \----- Carubv10016704m [Capsella rubella] (28) | | | | | | | /-100+ /----- Csa16g003090.1 [Camelina sativa] (26) | | | | | /-100+ | | | | | | \----- Csa07g003790.1 [Camelina sativa] (51) | | \-100+ \-100+ --95-+ | | \---------- Csa05g093030.1 [Camelina sativa] (81) | | | | | \-------------------- Bostr.13158s0105.1.p [Boechera stricta] (92) | | | \-------------------------------------------------------- KFK35314.1 [Arabis alpina] (80) | \------------------------------------------------------------- Tp5g02230 [Thellungiella parvula] (99) Root part of tree: /------------------------------------------------------------------ XP_013592301.1 [Brassica oleracea] (1) | |------------------------------------------------------------------ GSBRNA2T00082469001 [Brassica napus] (65) | | /-------------------------- (200) | | + /-----100-----+ /------------- Thhalv10005786m [Eutrema salsugineum] (22) | | \-----100----+ | /-----100----+ \------------- 676749604 [Sisymbrium irio] (25) | | | | | \---------------------------------------- RrC2365_p2 [Raphanus raphanistrum] (70) \-----100----+ | /------------- GSBRNA2T00099053001 [Brassica napus] (40) \------------------100------------------+ \------------- XP_009104292.1 [Brassica rapa] (89) |