PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1116
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 168: /-------------------- Thecc1EG034439t1 [Theobroma cacao] (5) | | /---------- Gh_A05G1905 [Gossypium hirsutum] (27) | | /-100+ /-100+ /----- Gh_D05G2140 [Gossypium hirsutum] (40) | | | \-100+ | | | \----- Gorai.009G233000.1 [Gossypium raimondii] (45) | | | | \-95-+ /----- Gh_A02G0792 [Gossypium hirsutum] (39) | | /-100+ | | | \----- Cotton_A_15447_BGI-A2_v1.0 [Gossypium arboreum] (67) | \-100+ /-100+ | /----- Gorai.005G094800.1 [Gossypium raimondii] (50) | | \-66-+ | | \----- Gh_D02G0841 [Gossypium hirsutum] (53) | | | | /----- Ciclev10001811m [Citrus clementina] (7) | | /-100+ /---------100--------+ | | \----- orange1.1g020210m [Citrus sinensis] (88) | | \------100-----+ | | | /----- Neem_14357_f_2 [Azadirachta indica] (28) | | \-100+ | | \----- Neem_36093_f_2 [Azadirachta indica] (78) | | | \------------------------------ evm.model.supercontig_36.191 [Carica papaya] (87) | | /--------------- Gh_A13G1525 [Gossypium hirsutum] (6) | | | | /----- Gh_D13G1856 [Gossypium hirsutum] (17) | /------100-----+ /-100+ | | | | \----- Gorai.013G204300.1 [Gossypium raimondii] (86) | | \-66-+ | | \---------- Cotton_A_22395_BGI-A2_v1.0 [Gossypium arboreum] (41) | | | | /----- Gh_A08G1880 [Gossypium hirsutum] (19) | | /------100-----+ | /--64-+ | \----- Cotton_A_16840_BGI-A2_v1.0 [Gossypium arboreum] (77) | | | | /-99-+ | | | /---------- Gh_D11G2701 [Gossypium hirsutum] (31) | | | | /-99-+ | | | | | | | /-75-+ /----- Gh_A11G2386 [Gossypium hirsutum] (96) | | | | | | | \-95-+ | | | | | \-100+ \----- Cotton_A_37514_BGI-A2_v1.0 [Gossypium arboreum] (98) | | | \-100+ | | | /-100+ | \--------------- Gorai.007G294800.1 [Gossypium raimondii] (72) | | | | | | | | | \------------------------- Thecc1EG026599t1 [Theobroma cacao] (73) | | | | | | | | /----- Neem_24331_f_1 [Azadirachta indica] (34) | | | | /-100+ | | /-100+ | | \----- Neem_14212_f_1 [Azadirachta indica] (65) | | | | \-----------100-----------+ | | | | \---------- orange1.1g036531m [Citrus sinensis] (90) | | | | /-100+ | | |----------------------------------------- Eucgr.B02000.1.p [Eucalyptus grandis] (10) | | | | | | | | | \----------------------------------------- Eucgr.H04468.1.p [Eucalyptus grandis] (42) | | | | | | \-100+ /----- orange1.1g043618m [Citrus sinensis] (12) | | | /-100+ | | | | \----- Ciclev10026131m [Citrus clementina] (68) | | | /-100+ | | | | | /----- Neem_1471_f_5 [Azadirachta indica] (64) | | | | \-100+ --95-+ | | /-99-+ \----- Neem_23313_f_1 [Azadirachta indica] (85) | | | | | | | \-----------100-----------+ \--------------- evm.model.supercontig_55.64 [Carica papaya] (92) | | | | | \-------------------- Eucgr.H04738.1.p [Eucalyptus grandis] (89) | | | \-------------------------------------------------------- Eucgr.B00048.1.p [Eucalyptus grandis] (51) | | /----- XP_010535287.1 [Tarenaya hassleriana] (82) \--------------------------100--------------------------+ \----- XP_010521172.1 [Tarenaya hassleriana] (95) Subtree rooted at node 171: /----- GSBRNA2T00073087001 [Brassica napus] (2) /-99-+ | \----- XP_009110135.1 [Brassica rapa] (33) /-100+ | | /----- GSBRNA2T00153148001 [Brassica napus] (47) | \-100+ /-100+ \----- XP_013603073.1 [Brassica oleracea] (91) | | | | /----- RrC8589_p1 [Raphanus raphanistrum] (36) /----88---+ \---100---+ | | \----- Rsa1.0_00133.1_g00010.1 [Raphanus sativus] (93) | | | \-------------------- Thhalv10009836m [Eutrema salsugineum] (23) | | /----- 335492 [Arabidopsis lyrata] (3) /--52-+ /-100+ | | | \----- Araha.2296s0007.1.p [Arabidopsis halleri] (43) | | /------99------+ | | | \---------- AT1G22490.1 [Arabidopsis thaliana] (80) | | | | | | /-------------------- Bostr.12659s0103.1.p [Boechera stricta] (30) | \-100+ | | | | /---------- Csa17g029420.1 [Camelina sativa] (49) | | | | | \-100+ /-100+ /----- Csa14g027690.1 [Camelina sativa] (76) | | | \-100+ | | | \----- Csa03g026360.1 [Camelina sativa] (81) | \-73-+ | | /----- Carubv10011476m [Capsella rubella] (55) | \---100---+ | \----- Cagra.0114s0053.1.p [Capsella grandiflora] (79) | /-59-+ /----- XP_013584555.1 [Brassica oleracea] (13) | | /-100+ | | | \----- GSBRNA2T00119510001 [Brassica napus] (44) | | /-100+ | | | | /----- GSBRNA2T00015730001 [Brassica napus] (20) | | | \-100+ | | /-100+ \----- XP_009123119.1 [Brassica rapa] (56) | | | | | | | | /----- Rsa1.0_00433.1_g00008.1 [Raphanus sativus] (22) | | /-100+ \---100---+ | | | | \----- RrC23716_p1 [Raphanus raphanistrum] (97) | | | | | | /-50-+ \-------------------- 676753784 [Sisymbrium irio] (66) | | | | /-99-+ | | \------------------------- Tp1g19970 [Thellungiella parvula] (32) | | | | | | \--83-+ /----- Rsa1.0_00988.1_g00003.1 [Raphanus sativus] (18) | | | /---100---+ | | | | \----- RrC6081_p1 [Raphanus raphanistrum] (46) | | | | | | \------100-----+ /----- XP_013596038.1 [Brassica oleracea] (25) | | | /-100+ /-100+ | | | \----- GSBRNA2T00061885001 [Brassica napus] (38) | | | \-100+ | | | | /----- XP_009103235.1 [Brassica rapa] (59) | | | \-100+ | | | \----- GSBRNA2T00085942001 [Brassica napus] (110) /-100+ | | | | | \----------------------------------------- KFK44344.1 [Arabis alpina] (100) | | | | | \---------------------------------------------- AA39G00438 [Aethionema arabicum] (62) /-100+ | | | \--------------------------------------------------- (168) | | --96-+ \-------------------------------------------------------- AA31G00146 [Aethionema arabicum] (94) | \------------------------------------------------------------- KFK41642.1 [Arabis alpina] (57) Root part of tree: /------------------------------------------------------------------ RrC13578_p1 [Raphanus raphanistrum] (1) | |------------------------------------------------------------------ Rsa1.0_00257.1_g00003.1 [Raphanus sativus] (24) | | /------------------------------ (171) | | | | /----- Csa16g034840.1 [Camelina sativa] (8) | | /-97-+ | | | \----- Csa07g039230.1 [Camelina sativa] (15) | | /-100+ | | | | /----- Csa07g021990.1 [Camelina sativa] (54) | /-100-+ | \-100+ | | | /-100+ \----- Csa09g075680.1 [Camelina sativa] (99) | | | | | | | | | | /----- Carubv10020657m [Capsella rubella] (29) | | | /-98-+ \---100---+ | | | | | \----- Cagra.4006s0007.1.p [Capsella grandiflora] (69) | | | | | | /-100+ \-100+ \-------------------- Bostr.10273s0131.1.p [Boechera stricta] (120) | | | | | | | | /----- AT1G72210.1 [Arabidopsis thaliana] (9) | | | \--------100--------+ | /-70-+ | \----- Araha.10095s0001.1.p [Arabidopsis halleri] (75) | | | | | | | \------------------------------------ Thhalv10018867m [Eutrema salsugineum] (70) + | | | | \----------------------------------------- 676751756 [Sisymbrium irio] (71) | | | | /----- XP_009105879.1 [Brassica rapa] (11) | /-91-+ /-100+ | | | | \----- GSBRNA2T00102536001 [Brassica napus] (60) | | | | | | | /-100+ /----- GSBRNA2T00103287001 [Brassica napus] (26) | | | | | | | | | | \-97-+----- XP_013588246.1 [Brassica oleracea] (52) | /-99-+ \--------------100-------------+ | | | | | \----- GSBRNA2T00064294001 [Brassica napus] (74) | | | | | | | \--------------- Rsa1.0_00139.1_g00017.1 [Raphanus sativus] (21) | | | | | \--------------------------------------------------- Tp5g27300 [Thellungiella parvula] (83) | | | /-100+ /----- XP_013588773.1 [Brassica oleracea] (4) | | | /-100+ | | | | \----- GSBRNA2T00096725001 [Brassica napus] (14) | | | /-100+ | | | | | /----- XP_009104863.1 [Brassica rapa] (35) | | | | \-100+ | | \-------------------100------------------+ \----- GSBRNA2T00099555001 [Brassica napus] (63) | | | \-100+ | /----- RrC7777_p1 [Raphanus raphanistrum] (58) | \---100---+ | \----- Rsa1.0_00060.1_g00029.1 [Raphanus sativus] (61) | | /----- XP_013618510.1 [Brassica oleracea] (16) | /-100+ | | \----- GSBRNA2T00137238001 [Brassica napus] (37) \------------------------100-----------------------+ | /----- XP_009127909.1 [Brassica rapa] (48) \-100+ \----- GSBRNA2T00116433001 [Brassica napus] (84) |