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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA789
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Subtree rooted at node 168: /----- cra_locus_7726_iso_6 [Catharanthus roseus] (2) /----------------------65----------------------+ | \----- Cc10_g08200 [Coffea canephora] (4) | | /----- Ote100074990011 [Ocimum tenuiflorum] (3) | /-100+ | | \----- Ote100074990012 [Ocimum tenuiflorum] (59) |--------------------91-------------------+ | \---------- EPS62935.1 [Genlisea aurea] (87) | | /-------------------------- CA02g02540 [Capsicum annuum] (5) | | | | /----- Sopim02g063430.0.1 [Solanum pimpinellifolium] (11) | | /-100+ | | | \----- Solyc02g063430.2.1 [Solanum lycopersicum] (41) | /-100+ /-100+ | | | | \---------- Sopen02g014520.1 [Solanum pennellii] (65) | | | /-100-+ | | | | \--------------- PGSC0003DMP400018368 [Solanum tuberosum] (42) | | \-100+ | | \--------------------- Sme2.5_03403.1_g00001.1 [Solanum melongena] (78) | | | /-100+ /----- XP_016465310.1 [Nicotiana tabacum] (39) | | | /-100+ | | | | \----- XP_009797668.1 [Nicotiana sylvestris] (61) | | | /-91-+ | | | | \---------- Niben101Scf07073g04002.1 [Nicotiana benthamiana] (40) | | | /--78-+ | | | | \--------------- Niben101Scf01316g05002.1 [Nicotiana benthamiana] (57) | /-100+ \---100---+ | | | | /----- XP_009600953.1 [Nicotiana tomentosiformis] (50) | | | \------100------+ | | | \----- XP_016502344.1 [Nicotiana tabacum] (79) | | | | | | /----- Peinf101Scf01139g00007.1 [Petunia inflata] (38) | | \--------------100-------------+ | | \----- Peaxi162Scf00943g00310.1 [Petunia axillaris] (49) | | | | /----- Peaxi162Scf01190g00006.1 [Petunia axillaris] (9) | | /-----------100-----------+ | | | \----- Peinf101Scf00468g06012.1 [Petunia inflata] (85) | /-100+ | | | | | /--------------------- Sme2.5_15542.1_g00001.1 [Solanum melongena] (37) | | | | | | | | /-86-+ | /----- Sopim02g091690.0.1 [Solanum pimpinellifolium] (55) | | | | | | /-88-+ | | | | | /-100+ | \----- Solyc02g091690.2.1 [Solanum lycopersicum] (92) | | | | | | | /-100+ | | | | | | | | \---------- Sopen02g036300.1 [Solanum pennellii] (60) | | | | \-100+ \-100-+ | | | | | \--------------- PGSC0003DMP400053318 [Solanum tuberosum] (64) | | | | | | | | | \-------------------------- CA02g24420 [Capsicum annuum] (83) | | \-100+ |--93-+ | /----- XP_009596776.1 [Nicotiana tomentosiformis] (16) | | | /-100+ | | | | \----- XP_016515694.1 [Nicotiana tabacum] (91) | | | /-96-+ | | | | \---------- Niben101Scf00069g08002.1 [Nicotiana benthamiana] (86) | | | /--97-+ | | | | \--------------- Niben101Scf00351g02003.1 [Nicotiana benthamiana] (34) | | \------100-----+ | | | /----- XP_009778689.1 [Nicotiana sylvestris] (19) | | \------100------+ | | \----- XP_016507553.1 [Nicotiana tabacum] (72) | | | | /----- Itr_sc002913.1_g00002.1 [Ipomoea trifida] (12) | \-------------------95-------------------+ | \----- Itr_sc000228.1_g00019.1 [Ipomoea trifida] (76) | | /----- Achn041801 [Actinidia chinensis] (10) |----------------------100---------------------+ | \----- Achn087871 [Actinidia chinensis] (67) | | /----- Peaxi162Scf01209g00011.1 [Petunia axillaris] (13) | /--------------100-------------+ | | \----- Peinf101Scf01129g02006.1 [Petunia inflata] (23) | | | | /----- Sopim00g050430.0.1 [Solanum pimpinellifolium] (14) | | /-100+ | | | \----- Solyc00g050430.2.1 [Solanum lycopersicum] (77) | | /-100+ | | | \---------- Sopen04g030550.1 [Solanum pennellii] (29) | | /-100-+ /-100+-------97------+ | \--------------- PGSC0003DMP400011343 [Solanum tuberosum] (51) | | | /-75-+ | | | | \--------------------- Sme2.5_13712.1_g00001.1 [Solanum melongena] (25) | | | /-100+ | | | | \-------------------------- CA04g17180 [Capsicum annuum] (32) | | | | | | | | /----- XP_016487716.1 [Nicotiana tabacum] (24) | | | | /-100+ | | | | | \----- XP_009772518.1 [Nicotiana sylvestris] (94) | | \-100+ /-86-+ | | | | \---------- Niben101Scf03068g04001.1 [Nicotiana benthamiana] (52) | | | /-100-+ | | | | | /----- XP_016490472.1 [Nicotiana tabacum] (27) | | | | \---100---+ | | \---100---+ \----- XP_009623441.1 [Nicotiana tomentosiformis] (36) | | | | | \--------------------- Niben101Scf06860g00001.1 [Nicotiana benthamiana] (63) | | | | /----- Ote100111190081 [Ocimum tenuiflorum] (15) | | /-94-+ | | | \----- Ote100111190082 [Ocimum tenuiflorum] (89) | | /-100+ | | | \---------- Ote100111190071 [Ocimum tenuiflorum] (80) | | /--97-+ | | | \--------------- SMil_00004865-RA_Salv [Salvia miltiorrhiza] (70) | | /-76-+ | | | \--------------------- XP_011099455.1 [Sesamum indicum] (81) | | /-100+ | | | \-------------------------- XP_011073848.1 [Sesamum indicum] (95) | |---------74---------+ | | \------------------------------- Migut.H00297.1.p [Mimulus guttatus] (30) | | | | /----- EPS64228.1 [Genlisea aurea] (17) | | /----72---+ | | | \----- KZV54504.1 [Dorcoceras hygrometricum] (35) | | | | | | /----- SMil_00010170-RA_Salv [Salvia miltiorrhiza] (20) | | |---100---+ | | | \----- SMil_00013925-RA_Salv [Salvia miltiorrhiza] (44) | | | | | |--------------- XP_011078455.1 [Sesamum indicum] (21) | | | | | | /----- XP_011074290.1 [Sesamum indicum] (22) /-100+ |-----------------72-----------------+----73---+ | | | | \----- Migut.N02832.1.p [Mimulus guttatus] (54) | | | | | | | | /----- Ote100061800021 [Ocimum tenuiflorum] (26) | | | |----64---+ | | | | \----- Ote100079200021 [Ocimum tenuiflorum] (73) | | | | | | | | /----- SMil_00003632-RA_Salv [Salvia miltiorrhiza] (48) | | | | /-86-+ | | | | | \----- Ote100077310101 [Ocimum tenuiflorum] (96) | | | \-97-+ | | | \---------- Ote100240600091 [Ocimum tenuiflorum] (84) | | | | | | /----- DCAR_019332 [Daucus carota] (18) | | |----------------------94----------------------+ | | | \----- DCAR_009550 [Daucus carota] (62) | | | | | | /----- Achn222131 [Actinidia chinensis] (28) | | |----------------------100---------------------+ | | | \----- Achn125541 [Actinidia chinensis] (47) | | | | | | /----- cra_locus_18737_iso_1 [Catharanthus roseus] (43) | | |----------------------61----------------------+ | | | \----- DCAR_025855 [Daucus carota] (74) | | | | | |---------------------------------------------------- Cc07_g07810 [Coffea canephora] (45) | | | --100+ | | /----- Achn338911 [Actinidia chinensis] (56) | | |----------------------100---------------------+ | | | \----- Achn147751 [Actinidia chinensis] (88) | | | | | |---------------------------------------------------- Itr_sc001167.1_g00009.1 [Ipomoea trifida] (68) | | | | | |---------------------------------------------------- 678449614 [Utricularia gibba] (71) | | | | | |---------------------------------------------------- DCAR_010759 [Daucus carota] (75) | | | | | |---------------------------------------------------- Itr_sc000027.1_g00005.1 [Ipomoea trifida] (82) | | | | | \---------------------------------------------------- Itr_sc002834.1_g00001.1 [Ipomoea trifida] (93) | | | | /---------- Peaxi162Scf00160g00836.1 [Petunia axillaris] (7) | | | | \----------------------100---------------------+ /----- Peinf101Scf00125g05004.1 [Petunia inflata] (58) | \-100+ | \----- Peinf101Scf00125g05013.1 [Petunia inflata] (69) | | /---------- PGSC0003DMP400003676 [Solanum tuberosum] (6) | | | /-100+ /----- Sopim12g088130.0.1 [Solanum pimpinellifolium] (66) | | \-100+ | /-100-+ \----- Solyc12g088130.1.1 [Solanum lycopersicum] (90) | | | \-------------------100------------------+ \--------------- Sme2.5_12177.1_g00001.1 [Solanum melongena] (97) | \--------------------- CA12g15610 [Capsicum annuum] (46) Root part of tree: /------------------------------------------------------------------- XP_016457676.1 [Nicotiana tabacum] (1) | |------------------------------------------------------------------- XP_009796654.1 [Nicotiana sylvestris] (53) | + /-------------------------------------------------- (168) | | | | /----------------- XP_009619169.1 [Nicotiana tomentosiformis] (8) \-------100------+ /------100------+ | | \----------------- XP_016511999.1 [Nicotiana tabacum] (33) \-------65-------+ \--------------------------------- Niben101Scf32858g00002.1 [Nicotiana benthamiana] (31) |