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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA499
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Subtree rooted at node 154: /----- XP_009774314.1 [Nicotiana sylvestris] (2) /-100+ | \----- XP_016442369.1 [Nicotiana tabacum] (58) /-66-+ | | /----- XP_009608611.1 [Nicotiana tomentosiformis] (37) | \-100+ /------100------+ \----- XP_016466963.1 [Nicotiana tabacum] (57) | | | | /----- Niben101Scf06493g01013.1 [Nicotiana benthamiana] (8) | \----87---+ | \----- Niben101Scf06560g01004.1 [Nicotiana benthamiana] (33) | | /--------------- PGSC0003DMP400002483 [Solanum tuberosum] (22) | | /-100+ | /---------- Sopen02g034000.1 [Solanum pennellii] (38) | | | | | | /--66-+-100+ /----- Sopim02g089210.0.1 [Solanum pimpinellifolium] (54) | | | | \-100+ | | | | \----- Solyc02g089210.2.1 [Solanum lycopersicum] (64) | | /-100+ | | | | | \--------------- Sme2.5_00037.1_g00006.1 [Solanum melongena] (47) | | | | | \-85-+ \--------------------- CA02g27000 [Capsicum annuum] (97) | | | | /----- Peaxi162Scf00020g02337.1 [Petunia axillaris] (24) | \---------100--------+ | \----- Peinf101Scf00359g02013.1 [Petunia inflata] (29) | /-100+ /--------------- Niben101Scf06076g00011.1 [Nicotiana benthamiana] (30) | | | | | /-100-+ /---------- Niben101Scf06076g00010.1 [Nicotiana benthamiana] (43) | | | | | | | | \-76-+ /----- XP_009762175.1 [Nicotiana sylvestris] (62) | | | \-100+ | | /-100+ \----- XP_016497178.1 [Nicotiana tabacum] (70) | | | | | | | | /----- XP_016492111.1 [Nicotiana tabacum] (87) | | | \------100------+ | | | \----- XP_009616788.1 [Nicotiana tomentosiformis] (88) /-100+ | | | | | | /----- Solyc02g065730.1.1 [Solanum lycopersicum] (32) | | \---100---+ /-100+ | | | | \----- Sopim02g065730.0.1 [Solanum pimpinellifolium] (39) | | | /-100+ | | | | \---------- Sopen02g015950.1 [Solanum pennellii] (35) | | | /-100-+ /--70-+ | | | \--------------- PGSC0003DMP400046163 [Solanum tuberosum] (67) | | | \-100+ | | | \--------------------- CA02g08200 [Capsicum annuum] (59) | | | | | \----------------------------------------- cra_locus_6180_iso_5 [Catharanthus roseus] (81) | | | | /----- Achn245331 [Actinidia chinensis] (36) | \-------------------94-------------------+ /-100+ \----- Cc07_g04450 [Coffea canephora] (78) | | | | /----- Migut.H00589.1.p [Mimulus guttatus] (9) | | /-100+ | | | \----- Ote100189900031 [Ocimum tenuiflorum] (53) | | /-99-+ | | | \---------- XP_011099043.1 [Sesamum indicum] (50) | \-----------------96-----------------+ | \--------------- XP_011085591.1 [Sesamum indicum] (94) | | /----- Ote100006780071 [Ocimum tenuiflorum] (12) | /-100+ | | \----- Ote100006780072 [Ocimum tenuiflorum] (71) | /-100+ | | \---------- Ote100050100041 [Ocimum tenuiflorum] (76) | /--78-+ | | \--------------- XP_011071269.1 [Sesamum indicum] (55) | /-100+ | | \--------------------- Migut.E00037.1.p [Mimulus guttatus] (21) | | | /-82-+ /----- SMil_00004943-RA_Salv [Salvia miltiorrhiza] (16) | | | /-100+ /-99-+ | | | \----- SMil_00020855-RA_Salv [Salvia miltiorrhiza] (42) | | /-100+ \------100------+ | | | | \---------- Ote100109520081 [Ocimum tenuiflorum] (45) | | | | | | /-70-+ \------------------------------- 678449415 [Utricularia gibba] (72) | | | | | | /-100+ \------------------------------------ Cc11_g11710 [Coffea canephora] (66) | | | | | | | \----------------------------------------- cra_locus_10924_iso_2 [Catharanthus roseus] (41) | | | | | | /------------------------------- Itr_sc000078.1_g00029.1 [Ipomoea trifida] (17) | | /--70-+ | | | | | | /----- Niben101Scf01310g04011.1 [Nicotiana benthamiana] (19) | | | | | /----59---+ | | | | | | \----- XP_016434962.1 [Nicotiana tabacum] (73) | | | | | | | | | \------94------+ /----67----+ /---------- Niben101Scf02151g01003.1 [Nicotiana benthamiana] (26) | | | | | | | | | | | | \-76-+ /----- XP_016490845.1 [Nicotiana tabacum] (28) | | | | | \-96-+ --55-+ | | | | \----- XP_009778843.1 [Nicotiana sylvestris] (69) | | | | | | \-100+ \-100+ /---------- PGSC0003DMP400049310 [Solanum tuberosum] (20) | | | | | | | /-100+ /----- Solyc05g056620.1.1 [Solanum lycopersicum] (56) | | | | \-99-+ | | | /-100-+ \----- Sopim05g056620.0.1 [Solanum pimpinellifolium] (93) | | | | | | | \-93-+ \--------------- Sme2.5_03164.1_g00003.1 [Solanum melongena] (23) | | | | | \--------------------- Peinf101Scf01278g05031.1 [Petunia inflata] (68) | | | \---------------------------------------------------- Achn143731 [Actinidia chinensis] (83) | | /----- cra_locus_762_iso_9 [Catharanthus roseus] (15) |---------------------------50---------------------------+ | \----- Itr_sc001779.1_g00008.1 [Ipomoea trifida] (61) | |-------------------------------------------------------------- Cc00_g02800 [Coffea canephora] (34) | \-------------------------------------------------------------- Achn247791 [Actinidia chinensis] (75) Root part of tree: /------------------------------------------------------------------- Sme2.5_00537.1_g00012.1 [Solanum melongena] (1) | | /-------------------- PGSC0003DMP400042629 [Solanum tuberosum] (5) | | | | /------- Solyc03g114830.2.1 [Solanum lycopersicum] (40) |----------------------100---------------------+ /--99-+ | | | \------- Sopim03g114830.0.1 [Solanum pimpinellifolium] (95) | \--100-+ | \------------- Sopen03g033910.1 [Solanum pennellii] (91) | | /--------------------------------- (154) | | | | /------- 678363687 [Utricularia gibba] (6) | | /--80-+ | | | \------- 678444359 [Utricularia gibba] (46) | | /--98--+ | | | \------------- EPS59036.1 [Genlisea aurea] (25) | | /--60--+ | | | \-------------------- Migut.D01622.1.p [Mimulus guttatus] (74) | | | | | |--------------------------- SMil_00021916-RA_Salv [Salvia miltiorrhiza] (11) | | | | | | /------- Ote100071630081 [Ocimum tenuiflorum] (44) | /--76--+--83-+--------100--------+ | | | | \------- Ote100071630021 [Ocimum tenuiflorum] (63) | | | | | | | |--------------------------- Ote100078830121 [Ocimum tenuiflorum] (80) | | | | | | | \--------------------------- XP_011086917.1 [Sesamum indicum] (96) | | | | | |--------------------------------- KZV15986.1 [Dorcoceras hygrometricum] (10) | | | | | |--------------------------------- Itr_sc002656.1_g00004.1 [Ipomoea trifida] (79) | | | | | |--------------------------------- cra_locus_68077_iso_1 [Catharanthus roseus] (84) + | | | | \--------------------------------- Ote100126410021 [Ocimum tenuiflorum] (85) | | | | /------- Sopim06g069430.0.1 [Solanum pimpinellifolium] (3) | /--100-+ /--99-+ | | | | \------- Solyc06g069430.2.1 [Solanum lycopersicum] (82) | | | /--99--+ | | | | \------------- Sopen06g026710.1 [Solanum pennellii] (65) | | | /--100-+ | | | | \-------------------- PGSC0003DMP400007293 [Solanum tuberosum] (18) | | | | | | | | /------------- Niben101Scf03756g01007.1 [Nicotiana benthamiana] (14) | | | | | | | | /--78-+ | /------- XP_009761886.1 [Nicotiana sylvestris] (27) | | | | | /--55--+-100-+ | | | | | | | \------- XP_016468661.1 [Nicotiana tabacum] (49) | /--93--+ | | | | | | | | | | \--78--+ \------------- Niben101Scf04410g05002.1 [Nicotiana benthamiana] (52) | | | | | | | | | \--76--+ | /------- XP_016448958.1 [Nicotiana tabacum] (51) | | | | \-----100----+ | | | | \------- XP_009603844.1 [Nicotiana tomentosiformis] (86) | | | | | | | | /------- Peaxi162Scf00013g00725.1 [Petunia axillaris] (13) | | | \------------63-----------+ | | | \------- Peinf101Scf00500g03031.1 [Petunia inflata] (60) | /-100-+ | | | | | /------- Peinf101Scf01556g01036.1 [Petunia inflata] (77) | | | \------------------100------------------+ | | | \------- Peaxi162Scf00017g03265.1 [Petunia axillaris] (90) | | | | | | /-------------------- XP_009792071.1 [Nicotiana sylvestris] (7) | | | | | | | | /------- XP_016451215.1 [Nicotiana tabacum] (31) \--97--+ | | /-100-+ | \---------------100---------------+ | \------- XP_009625854.1 [Nicotiana tomentosiformis] (89) | |--92--+ | | \------------- Niben101Scf01143g03005.1 [Nicotiana benthamiana] (92) | | | \-------------------- XP_016496095.1 [Nicotiana tabacum] (48) | \------------------------------------------------------------ cra_locus_53502_iso_1 [Catharanthus roseus] (4) |