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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1628
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Subtree rooted at node 119: /---------- Sopen04g032740.1 [Solanum pennellii] (2) | /-97-+ /----- Sopim04g079130.0.1 [Solanum pimpinellifolium] (69) | \-100+ /--92-+ \----- Solyc04g079130.2.1 [Solanum lycopersicum] (70) | | /-100+ \--------------- PGSC0003DMP400014111 [Solanum tuberosum] (51) | | /-61-+ \--------------------- Sme2.5_18295.1_g00001.1 [Solanum melongena] (9) | | | \-------------------------- CA04g19000 [Capsicum annuum] (37) | /-100+ /----- Niben101Scf07004g02016.1 [Nicotiana benthamiana] (4) | | /----62---+ | | | \----- Niben101Scf12928g01020.1 [Nicotiana benthamiana] (53) | | | | \-------61------+ /----- XP_009620219.1 [Nicotiana tomentosiformis] (13) | | /-100+ | | | \----- XP_016488337.1 [Nicotiana tabacum] (67) /-100+ \-93-+ | | | /----- XP_016434462.1 [Nicotiana tabacum] (14) | | \-99-+ | | \----- XP_009783454.1 [Nicotiana sylvestris] (20) | | /-99-+ | /----- Peinf101Scf01172g02034.1 [Petunia inflata] (40) | | \--------------97--------------+ | | \----- Peaxi162Scf00252g01219.1 [Petunia axillaris] (68) | | | \----------------------------------------- Itr_sc000415.1_g00001.1 [Ipomoea trifida] (34) /--50-+ | | /--------------- Migut.C00592.1.p [Mimulus guttatus] (7) | | | | | | /----- Ote100269130091 [Ocimum tenuiflorum] (29) | | | /-100+ | \--------------78--------------+ | \----- SMil_00020680-RA_Salv [Salvia miltiorrhiza] (62) | | | | | | /----- XP_011083860.1 [Sesamum indicum] (32) /-50-+ \-70-+-98-+ | | | \----- XP_011083863.1 [Sesamum indicum] (39) | | | | | \---------- KZV28896.1 [Dorcoceras hygrometricum] (61) | | | |---------------------------------------------------- cra_locus_15010_iso_2 [Catharanthus roseus] (59) | | | \---------------------------------------------------- Cc10_g04280 [Coffea canephora] (63) | | /----- XP_016513012.1 [Nicotiana tabacum] (3) | /-100+ | | \----- XP_009772548.1 [Nicotiana sylvestris] (48) | | | /-100+---------- Niben101Scf29722g00001.1 [Nicotiana benthamiana] (44) | | | | | \---------- Niben101Scf01272g01024.1 [Nicotiana benthamiana] (45) | /----100---+ | | | /----- XP_009612758.1 [Nicotiana tomentosiformis] (5) | | \---100---+ | | \----- XP_016515736.1 [Nicotiana tabacum] (35) | | | | /----- Solyc01g108130.2.1 [Solanum lycopersicum] (6) | /-100+ /-100+ | | | | \----- Sopim01g108130.0.1 [Solanum pimpinellifolium] (41) | | | /-99-+ | | | | \---------- Sopen01g050360.1 [Solanum pennellii] (47) | | | /-100-+ |-----------100-----------+ | | \--------------- PGSC0003DMP400044706 [Solanum tuberosum] (58) | | \-100+ | | \--------------------- CA00g41400 [Capsicum annuum] (54) | | | \------------------------------- Peinf101Scf01271g03007.1 [Petunia inflata] (8) | | /---------- Migut.H01040.1.p [Mimulus guttatus] (10) | | |----------------------77----------------------+ /----- Migut.B00333.1.p [Mimulus guttatus] (31) | \-100+ | \----- Migut.B00332.1.p [Mimulus guttatus] (60) | |--------------------------------------------------------- XP_011088276.1 [Sesamum indicum] (11) | | /--------------------- CA00g41390 [Capsicum annuum] (12) | | | | /---------- Sopen01g050370.1 [Solanum pennellii] (16) |-----------------99----------------+ | | | /-100+ /----- Solyc01g108140.2.1 [Solanum lycopersicum] (28) /-96-+ | | \-100+ | | \-100-+ \----- Sopim01g108140.0.1 [Solanum pimpinellifolium] (55) | | | | | \--------------- PGSC0003DMP400044708 [Solanum tuberosum] (21) | | | | /---------- Achn273621 [Actinidia chinensis] (15) | | | | |----------------------50----------------------+ /----- Itr_sc000246.1_g00001.1 [Ipomoea trifida] (24) | | \-70-+ | | \----- Itr_sc010192.1_g00001.1 [Ipomoea trifida] (30) | | | |--------------------------------------------------------- Cc08_g05820 [Coffea canephora] (18) | | | |--------------------------------------------------------- Itr_sc000358.1_g00019.1 [Ipomoea trifida] (19) | | | | /----- cra_locus_16198_iso_5 [Catharanthus roseus] (23) | |------------------------100------------------------+ | | \----- Cc02_g18680 [Coffea canephora] (42) | | | | /--------------- XP_011088273.1 [Sesamum indicum] (25) | | | | | /--74-+ /---------- SMil_00013181-RA_Salv [Salvia miltiorrhiza] (36) | | | | | | | | \-87-+ /----- Ote100062960131 [Ocimum tenuiflorum] (57) --98-+ | | \-96-+ | | | \----- Ote100062960241 [Ocimum tenuiflorum] (71) | |-----------------55----------------+ | | | /----- EPS67764.1 [Genlisea aurea] (46) | | | /-93-+ | | | | \----- Migut.B00334.1.p [Mimulus guttatus] (49) | | \----86----+ | | \---------- KZV37446.1 [Dorcoceras hygrometricum] (52) | | | |--------------------------------------------------------- Itr_sc000100.1_g00040.1 [Ipomoea trifida] (33) | | | |--------------------------------------------------------- Niben101Scf07766g00007.1 [Nicotiana benthamiana] (38) | | | |--------------------------------------------------------- DCAR_019459 [Daucus carota] (43) | | | |--------------------------------------------------------- EPS67918.1 [Genlisea aurea] (50) | | | | /----- KZV37447.1 [Dorcoceras hygrometricum] (64) | |-------------------------59------------------------+ | | \----- SMil_00013180-RA_Salv [Salvia miltiorrhiza] (65) | | | \--------------------------------------------------------- KZV17764.1 [Dorcoceras hygrometricum] (66) | | /----- XP_009612757.1 [Nicotiana tomentosiformis] (22) \---------------------------99---------------------------+ \----- XP_016515734.1 [Nicotiana tabacum] (56) Root part of tree: /------------------------------------------------------------------- Niben101Scf28298g00006.1 [Nicotiana benthamiana] (1) | |------------------------------------------------------------------- Niben101Scf01272g01010.1 [Nicotiana benthamiana] (27) + | /--------------------------------------------- (119) | | \----------57---------+ /---------------------- XP_016513011.1 [Nicotiana tabacum] (17) \----------100---------+ \---------------------- XP_009772546.1 [Nicotiana sylvestris] (26) |