PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Rubus occidentalis
ERF Family
Species TF ID Description
Ro01_G03027ERF family protein
Ro01_G04133ERF family protein
Ro01_G10361ERF family protein
Ro01_G10689ERF family protein
Ro01_G10806ERF family protein
Ro01_G11629ERF family protein
Ro01_G20197ERF family protein
Ro01_G26157ERF family protein
Ro01_G29551ERF family protein
Ro01_G29739ERF family protein
Ro01_G29742ERF family protein
Ro01_G29743ERF family protein
Ro01_G29744ERF family protein
Ro01_G29746ERF family protein
Ro02_G00580ERF family protein
Ro02_G00697ERF family protein
Ro02_G01376ERF family protein
Ro02_G01425ERF family protein
Ro02_G01596ERF family protein
Ro02_G02455ERF family protein
Ro02_G03985ERF family protein
Ro02_G20091ERF family protein
Ro02_G22770ERF family protein
Ro02_G22771ERF family protein
Ro02_G22772ERF family protein
Ro02_G22773ERF family protein
Ro02_G22774ERF family protein
Ro02_G26717ERF family protein
Ro03_G05189ERF family protein
Ro03_G05190ERF family protein
Ro03_G06548ERF family protein
Ro03_G06550ERF family protein
Ro03_G08083ERF family protein
Ro03_G14536ERF family protein
Ro03_G18867ERF family protein
Ro03_G21181ERF family protein
Ro04_G02673ERF family protein
Ro04_G06409ERF family protein
Ro04_G08859ERF family protein
Ro04_G08877ERF family protein
Ro04_G12427ERF family protein
Ro04_G12429ERF family protein
Ro04_G12430ERF family protein
Ro04_G18901ERF family protein
Ro04_G24163ERF family protein
Ro04_G24702ERF family protein
Ro04_G25029ERF family protein
Ro05_G01834ERF family protein
Ro05_G01835ERF family protein
Ro05_G03424ERF family protein
Ro05_G09404ERF family protein
Ro05_G11781ERF family protein
Ro05_G11782ERF family protein
Ro05_G11958ERF family protein
Ro05_G15621ERF family protein
Ro05_G16292ERF family protein
Ro05_G17846ERF family protein
Ro05_G18407ERF family protein
Ro05_G22557ERF family protein
Ro05_G27917ERF family protein
Ro06_G05652ERF family protein
Ro06_G06673ERF family protein
Ro06_G08501ERF family protein
Ro06_G11109ERF family protein
Ro06_G11301ERF family protein
Ro06_G11870ERF family protein
Ro06_G11875ERF family protein
Ro06_G12356ERF family protein
Ro06_G16836ERF family protein
Ro06_G17587ERF family protein
Ro06_G18361ERF family protein
Ro06_G20504ERF family protein
Ro06_G22225ERF family protein
Ro06_G22690ERF family protein
Ro06_G25095ERF family protein
Ro06_G27385ERF family protein
Ro06_G27871ERF family protein
Ro07_G04753ERF family protein
Ro07_G04784ERF family protein
Ro07_G06800ERF family protein
Ro07_G07937ERF family protein
Ro07_G09488ERF family protein
Ro07_G09490ERF family protein
Ro07_G19644ERF family protein
Ro07_G21107ERF family protein
Ro07_G21421ERF family protein
Ro07_G21422ERF family protein
Ro07_G23933ERF family protein
Ro07_G25400ERF family protein
Ro07_G25727ERF family protein
ERF Family Introduction

The AP2/ERF superfamily is defined by the AP2/ERF domain, which consists of about 60 to 70 amino acids and is involved in DNA binding. These three families have been defined as follows. The AP2 family proteins contain two repeated AP2/ERF domains, the ERF family proteins contain a single AP2/ERF domain, and the RAV family proteins contain a B3 domain, which is a DNA-binding domain conserved in other plant-specific transcription factors, in addition to the single AP2/ERF domain.

It has been demonstrated that the AP2/ERF proteins have important functions in the transcriptional regulation of a variety of biological processes related to growth and development, as well as various responses to environmental stimuli.

After finding the tobacco ERFs, many proteins in the ERF family were identified and implicated in many diverse functions in cellular processes, such as hormonal signal transduction, response to biotic and abiotic stresses, regulation of metabolism, and in developmental processes in various plant species.

Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura, and Hideaki Shinshi.
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol, 2006. 140(2): p. 411-32.
PMID: 16407444


The first class are proteins which bind to ethylene response elements (ERE) or GCC boxes (tobacco EREBPs, Arabidopsis AtEBP and AtERF1-5, and tomato Pti4-6) found in the promoters of ethylene-inducible pathogenesis related genes. The GCC box is an 11 bp sequence (TAAGAGCCGCC) with a core GCCGCC sequence that is required for binding.
The second class includes proteins that bind to the C-repeat or dehydration response element (DRE) in the promoters of genes that are turned on in response to low temperatures and/or water deficit (CBF1, CBF2, CBF3/DREB1A and DREB2A). The C-repeat/DREs contain the core sequence CCGAC.

Nole-Wilson S, Krizek BA.
DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA.
Nucleic Acids Res. 2000 Nov 1;28(21):4076-82. Erratum in: Nucleic Acids Res 2001 Mar 1;29(5):1261.
PMID: 11058102