PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Hevea brasiliensis (125) | XP_021636089.1 | FAR1 family protein |
XP_021636090.1 | FAR1 family protein | |
XP_021637198.1 | FAR1 family protein | |
XP_021638557.1 | FAR1 family protein | |
XP_021638558.1 | FAR1 family protein | |
XP_021639683.1 | FAR1 family protein | |
XP_021639684.1 | FAR1 family protein | |
XP_021639686.1 | FAR1 family protein | |
XP_021642829.1 | FAR1 family protein | |
XP_021642830.1 | FAR1 family protein | |
XP_021643561.1 | FAR1 family protein | |
XP_021643804.1 | FAR1 family protein | |
XP_021648039.1 | FAR1 family protein | |
XP_021648990.1 | FAR1 family protein | |
XP_021650432.1 | FAR1 family protein | |
XP_021650555.1 | FAR1 family protein | |
XP_021651397.1 | FAR1 family protein | |
XP_021652706.1 | FAR1 family protein | |
XP_021652707.1 | FAR1 family protein | |
XP_021652712.1 | FAR1 family protein | |
XP_021652713.1 | FAR1 family protein | |
XP_021652715.1 | FAR1 family protein | |
XP_021652716.1 | FAR1 family protein | |
XP_021652717.1 | FAR1 family protein | |
XP_021652720.1 | FAR1 family protein | |
XP_021653285.1 | FAR1 family protein | |
XP_021653894.1 | FAR1 family protein | |
XP_021653895.1 | FAR1 family protein | |
XP_021653896.1 | FAR1 family protein | |
XP_021653971.1 | FAR1 family protein | |
XP_021654631.1 | FAR1 family protein | |
XP_021655271.1 | FAR1 family protein | |
XP_021656529.1 | FAR1 family protein | |
XP_021660727.1 | FAR1 family protein | |
XP_021661259.1 | FAR1 family protein | |
XP_021661260.1 | FAR1 family protein | |
XP_021661261.1 | FAR1 family protein | |
XP_021661262.1 | FAR1 family protein | |
XP_021661265.1 | FAR1 family protein | |
XP_021661266.1 | FAR1 family protein | |
XP_021661267.1 | FAR1 family protein | |
XP_021661269.1 | FAR1 family protein | |
XP_021661270.1 | FAR1 family protein | |
XP_021661271.1 | FAR1 family protein | |
XP_021661518.1 | FAR1 family protein | |
XP_021661519.1 | FAR1 family protein | |
XP_021661520.1 | FAR1 family protein | |
XP_021662462.1 | FAR1 family protein | |
XP_021662467.1 | FAR1 family protein | |
XP_021662548.1 | FAR1 family protein | |
XP_021662549.1 | FAR1 family protein | |
XP_021662636.1 | FAR1 family protein | |
XP_021662638.1 | FAR1 family protein | |
XP_021662639.1 | FAR1 family protein | |
XP_021662640.1 | FAR1 family protein | |
XP_021663084.1 | FAR1 family protein | |
XP_021663768.1 | FAR1 family protein | |
XP_021665871.1 | FAR1 family protein | |
XP_021665877.1 | FAR1 family protein | |
XP_021665899.1 | FAR1 family protein | |
XP_021666293.1 | FAR1 family protein | |
XP_021667045.1 | FAR1 family protein | |
XP_021667046.1 | FAR1 family protein | |
XP_021667515.1 | FAR1 family protein | |
XP_021667519.1 | FAR1 family protein | |
XP_021668805.1 | FAR1 family protein | |
XP_021668806.1 | FAR1 family protein | |
XP_021668808.1 | FAR1 family protein | |
XP_021668809.1 | FAR1 family protein | |
XP_021669157.1 | FAR1 family protein | |
XP_021669803.1 | FAR1 family protein | |
XP_021669825.1 | FAR1 family protein | |
XP_021669826.1 | FAR1 family protein | |
XP_021671690.1 | FAR1 family protein | |
XP_021671691.1 | FAR1 family protein | |
XP_021671692.1 | FAR1 family protein | |
XP_021671693.1 | FAR1 family protein | |
XP_021671695.1 | FAR1 family protein | |
XP_021672394.1 | FAR1 family protein | |
XP_021672451.1 | FAR1 family protein | |
XP_021673133.1 | FAR1 family protein | |
XP_021673337.1 | FAR1 family protein | |
XP_021673538.1 | FAR1 family protein | |
XP_021673539.1 | FAR1 family protein | |
XP_021673540.1 | FAR1 family protein | |
XP_021678918.1 | FAR1 family protein | |
XP_021679145.1 | FAR1 family protein | |
XP_021680401.1 | FAR1 family protein | |
XP_021683473.1 | FAR1 family protein | |
XP_021683474.1 | FAR1 family protein | |
XP_021683475.1 | FAR1 family protein | |
XP_021683476.1 | FAR1 family protein | |
XP_021683477.1 | FAR1 family protein | |
XP_021683478.1 | FAR1 family protein | |
XP_021685930.1 | FAR1 family protein | |
XP_021685931.1 | FAR1 family protein | |
XP_021685932.1 | FAR1 family protein | |
XP_021685933.1 | FAR1 family protein | |
XP_021685934.1 | FAR1 family protein | |
XP_021685935.1 | FAR1 family protein | |
XP_021685936.1 | FAR1 family protein | |
XP_021686198.1 | FAR1 family protein | |
XP_021686278.1 | FAR1 family protein | |
XP_021686347.1 | FAR1 family protein | |
XP_021686480.1 | FAR1 family protein | |
XP_021686684.1 | FAR1 family protein | |
XP_021686685.1 | FAR1 family protein | |
XP_021687648.1 | FAR1 family protein | |
XP_021687649.1 | FAR1 family protein | |
XP_021687651.1 | FAR1 family protein | |
XP_021687750.1 | FAR1 family protein | |
XP_021688016.1 | FAR1 family protein | |
XP_021688141.1 | FAR1 family protein | |
XP_021688961.1 | FAR1 family protein | |
XP_021688962.1 | FAR1 family protein | |
XP_021689758.1 | FAR1 family protein | |
XP_021690458.1 | FAR1 family protein | |
XP_021690459.1 | FAR1 family protein | |
XP_021690460.1 | FAR1 family protein | |
XP_021691243.1 | FAR1 family protein | |
XP_021691244.1 | FAR1 family protein | |
XP_021691245.1 | FAR1 family protein | |
XP_021691246.1 | FAR1 family protein | |
XP_021691247.1 | FAR1 family protein | |
XP_021692626.1 | FAR1 family protein |
We show that Arabidopsis FHY3 and FAR1, which encode two proteins related to Mutator-like transposases, act together to modulate phyA signaling by directly activating the transcription of FHY1 and FHL, whose products are essential for light-induced phyA nuclear accumulation and subsequent light responses. FHY3 and FAR1 have separable DNA binding and transcriptional activation domains that are highly conserved in Mutator-like transposases. Further, expression of FHY3 and FAR1 is negatively regulated by phyA signaling. We propose that FHY3 and FAR1 represent transcription factors that have been co-opted from an ancient Mutator-like transposase(s) to modulate phyA-signaling homeostasis in higher plants.
We next used a yeast one-hybrid assay to delineate the DNA sequences to which FHY3 and FAR1 bind. GAD-FHY3 or GAD-FAR1 fusion proteins (GAD, GAL4 transcriptional activation domain), but not GAD alone, activated the LacZ reporter genes driven by the FHY1 and FHL promoters. Deletion analysis narrowed down the FHY3/FAR1 binding site to a 39-bp promoter subfragment located on the "a" fragment for both FHY1 and FHL. Notably, these subfragments share a stretch of consensus sequence, 5'-TTCACGCGCC-3'. Mutating the core sequence "CACGCGC" of this motif (m2 and m3 for FHY1, m5 for FHL) abolished the reporter gene activation by both GAD-FHY3 and GAD-FAR1. Mutating the flanking sequences (m1 and m4) did not obviously affect the reporter gene activation by GAD-FAR1, but clearly reduced activation by GAD-FHY3. Thus, "CACGCGC" likely defines a cis-element that confers specific binding for FHY3 and FAR1 and is named FBS for FHY3-FAR1 binding site.
Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H.
Transposase-derived transcription factors regulate light signaling in Arabidopsis.
Science, 2007. 318(5854): p. 1302-5.
PMID: 18033885