PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
XP_023511696.1 | GATA family protein | |
XP_023511697.1 | GATA family protein | |
XP_023512847.1 | GATA family protein | |
XP_023512848.1 | GATA family protein | |
XP_023512850.1 | GATA family protein | |
XP_023512851.1 | GATA family protein | |
XP_023513295.1 | GATA family protein | |
XP_023513554.1 | GATA family protein | |
XP_023513805.1 | GATA family protein | |
XP_023513994.1 | GATA family protein | |
XP_023513995.1 | GATA family protein | |
XP_023513996.1 | GATA family protein | |
XP_023514934.1 | GATA family protein | |
XP_023515141.1 | GATA family protein | |
XP_023516652.1 | GATA family protein | |
XP_023516653.1 | GATA family protein | |
XP_023516654.1 | GATA family protein | |
XP_023518599.1 | GATA family protein | |
XP_023522473.1 | GATA family protein | |
XP_023524318.1 | GATA family protein | |
XP_023524388.1 | GATA family protein | |
XP_023524877.1 | GATA family protein | |
XP_023528501.1 | GATA family protein | |
XP_023529146.1 | GATA family protein | |
XP_023530140.1 | GATA family protein | |
XP_023530322.1 | GATA family protein | |
XP_023531934.1 | GATA family protein | |
XP_023532079.1 | GATA family protein | |
XP_023532489.1 | GATA family protein | |
XP_023533953.1 | GATA family protein | |
XP_023535296.1 | GATA family protein | |
XP_023536995.1 | GATA family protein | |
XP_023536996.1 | GATA family protein | |
XP_023536998.1 | GATA family protein | |
XP_023538437.1 | GATA family protein | |
XP_023538546.1 | GATA family protein | |
XP_023538547.1 | GATA family protein | |
XP_023538548.1 | GATA family protein | |
XP_023538549.1 | GATA family protein | |
XP_023538706.1 | GATA family protein | |
XP_023539800.1 | GATA family protein | |
XP_023539801.1 | GATA family protein | |
XP_023539802.1 | GATA family protein | |
XP_023540763.1 | GATA family protein | |
XP_023542369.1 | GATA family protein | |
XP_023544460.1 | GATA family protein | |
XP_023544461.1 | GATA family protein | |
XP_023544803.1 | GATA family protein | |
XP_023546303.1 | GATA family protein | |
XP_023546304.1 | GATA family protein | |
XP_023546305.1 | GATA family protein | |
XP_023546306.1 | GATA family protein | |
XP_023546307.1 | GATA family protein | |
XP_023546990.1 | GATA family protein | |
XP_023547674.1 | GATA family protein | |
XP_023547675.1 | GATA family protein | |
XP_023547676.1 | GATA family protein | |
XP_023547677.1 | GATA family protein | |
XP_023547678.1 | GATA family protein | |
XP_023548663.1 | GATA family protein | |
XP_023548782.1 | GATA family protein | |
XP_023549360.1 | GATA family protein | |
XP_023551517.1 | GATA family protein | |
XP_023551796.1 | GATA family protein | |
XP_023551808.1 | GATA family protein | |
XP_023552240.1 | GATA family protein | |
XP_023554174.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008