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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
TRIDC1AG046200.1 | NF-YC family protein | |
TRIDC1AG046200.3 | NF-YC family protein | |
TRIDC1AG046200.4 | NF-YC family protein | |
TRIDC1AG052220.1 | NF-YC family protein | |
TRIDC1AG052220.2 | NF-YC family protein | |
TRIDC1AG052220.3 | NF-YC family protein | |
TRIDC1AG052370.1 | NF-YC family protein | |
TRIDC1BG052310.1 | NF-YC family protein | |
TRIDC1BG052310.2 | NF-YC family protein | |
TRIDC1BG052310.3 | NF-YC family protein | |
TRIDC1BG052310.4 | NF-YC family protein | |
TRIDC1BG059170.1 | NF-YC family protein | |
TRIDC1BG059340.1 | NF-YC family protein | |
TRIDC4AG011120.1 | NF-YC family protein | |
TRIDC4AG023960.5 | NF-YC family protein | |
TRIDC4AG023960.7 | NF-YC family protein | |
TRIDC4AG023960.8 | NF-YC family protein | |
TRIDC4AG049360.4 | NF-YC family protein | |
TRIDC4AG049360.5 | NF-YC family protein | |
TRIDC4AG049360.6 | NF-YC family protein | |
TRIDC4AG049360.7 | NF-YC family protein | |
TRIDC4BG026790.1 | NF-YC family protein | |
TRIDC4BG026790.2 | NF-YC family protein | |
TRIDC4BG026790.3 | NF-YC family protein | |
TRIDC4BG026790.4 | NF-YC family protein | |
TRIDC4BG026790.5 | NF-YC family protein | |
TRIDC4BG039440.1 | NF-YC family protein | |
TRIDC4BG039440.2 | NF-YC family protein | |
TRIDC4BG039440.3 | NF-YC family protein | |
TRIDC5AG040090.1 | NF-YC family protein | |
TRIDC5AG040090.2 | NF-YC family protein | |
TRIDC5AG040090.3 | NF-YC family protein | |
TRIDC5AG040090.4 | NF-YC family protein | |
TRIDC5BG042480.1 | NF-YC family protein | |
TRIDC5BG042480.2 | NF-YC family protein | |
TRIDC5BG042480.3 | NF-YC family protein | |
TRIDC5BG081750.1 | NF-YC family protein | |
TRIDC6AG022190.1 | NF-YC family protein | |
TRIDC6AG022190.2 | NF-YC family protein | |
TRIDC6BG027860.1 | NF-YC family protein | |
TRIDC6BG027860.2 | NF-YC family protein | |
TRIDC6BG027860.3 | NF-YC family protein | |
TRIDC7AG030580.1 | NF-YC family protein | |
TRIDC7AG030580.2 | NF-YC family protein | |
TRIDC7AG030580.3 | NF-YC family protein | |
TRIDC7AG046890.1 | NF-YC family protein | |
TRIDC7AG066360.1 | NF-YC family protein | |
TRIDC7AG066360.2 | NF-YC family protein | |
TRIDC7AG066360.3 | NF-YC family protein | |
TRIDC7AG066360.5 | NF-YC family protein | |
TRIDC7AG066360.6 | NF-YC family protein | |
TRIDC7AG066360.7 | NF-YC family protein | |
TRIDC7AG066440.1 | NF-YC family protein | |
TRIDC7BG021410.1 | NF-YC family protein | |
TRIDC7BG021410.2 | NF-YC family protein | |
TRIDC7BG021410.3 | NF-YC family protein | |
TRIDC7BG040850.1 | NF-YC family protein | |
TRIDC7BG060000.1 | NF-YC family protein | |
TRIDC7BG060060.1 | NF-YC family protein | |
TRIDC7BG060060.2 | NF-YC family protein |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982