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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Salvia splendens (36) | TEY12493.1 | NF-YB family protein |
TEY13496.1 | NF-YB family protein | |
TEY13741.1 | NF-YB family protein | |
TEY21260.1 | NF-YB family protein | |
TEY22651.1 | NF-YB family protein | |
TEY24497.1 | NF-YB family protein | |
TEY33141.1 | NF-YB family protein | |
TEY34412.1 | NF-YB family protein | |
TEY35829.1 | NF-YB family protein | |
TEY35830.1 | NF-YB family protein | |
TEY37567.1 | NF-YB family protein | |
TEY39915.1 | NF-YB family protein | |
TEY41705.1 | NF-YB family protein | |
TEY43750.1 | NF-YB family protein | |
TEY43847.1 | NF-YB family protein | |
TEY44193.1 | NF-YB family protein | |
TEY49280.1 | NF-YB family protein | |
TEY51470.1 | NF-YB family protein | |
TEY58429.1 | NF-YB family protein | |
TEY59326.1 | NF-YB family protein | |
TEY64988.1 | NF-YB family protein | |
TEY66272.1 | NF-YB family protein | |
TEY70015.1 | NF-YB family protein | |
TEY70052.1 | NF-YB family protein | |
TEY72312.1 | NF-YB family protein | |
TEY72313.1 | NF-YB family protein | |
TEY75520.1 | NF-YB family protein | |
TEY75536.1 | NF-YB family protein | |
TEY82295.1 | NF-YB family protein | |
TEY84998.1 | NF-YB family protein | |
TEY85379.1 | NF-YB family protein | |
TEY90743.1 | NF-YB family protein | |
TEY91153.1 | NF-YB family protein | |
TEY93123.1 | NF-YB family protein | |
TEY93247.1 | NF-YB family protein | |
TEY93249.1 | NF-YB family protein |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982