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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Durio zibethinus (57) | XP_022714458.1 | NF-YB family protein |
XP_022716738.1 | NF-YB family protein | |
XP_022720118.1 | NF-YB family protein | |
XP_022722660.1 | NF-YB family protein | |
XP_022724091.1 | NF-YB family protein | |
XP_022724092.1 | NF-YB family protein | |
XP_022728355.1 | NF-YB family protein | |
XP_022729175.1 | NF-YB family protein | |
XP_022729182.1 | NF-YB family protein | |
XP_022729192.1 | NF-YB family protein | |
XP_022729202.1 | NF-YB family protein | |
XP_022729212.1 | NF-YB family protein | |
XP_022731174.1 | NF-YB family protein | |
XP_022732788.1 | NF-YB family protein | |
XP_022734186.1 | NF-YB family protein | |
XP_022736832.1 | NF-YB family protein | |
XP_022736833.1 | NF-YB family protein | |
XP_022736835.1 | NF-YB family protein | |
XP_022736836.1 | NF-YB family protein | |
XP_022740523.1 | NF-YB family protein | |
XP_022744128.1 | NF-YB family protein | |
XP_022744129.1 | NF-YB family protein | |
XP_022744130.1 | NF-YB family protein | |
XP_022744131.1 | NF-YB family protein | |
XP_022744132.1 | NF-YB family protein | |
XP_022744133.1 | NF-YB family protein | |
XP_022744908.1 | NF-YB family protein | |
XP_022746818.1 | NF-YB family protein | |
XP_022746819.1 | NF-YB family protein | |
XP_022746820.1 | NF-YB family protein | |
XP_022746821.1 | NF-YB family protein | |
XP_022746822.1 | NF-YB family protein | |
XP_022747170.1 | NF-YB family protein | |
XP_022747191.1 | NF-YB family protein | |
XP_022747193.1 | NF-YB family protein | |
XP_022747194.1 | NF-YB family protein | |
XP_022747195.1 | NF-YB family protein | |
XP_022747196.1 | NF-YB family protein | |
XP_022749029.1 | NF-YB family protein | |
XP_022750922.1 | NF-YB family protein | |
XP_022753904.1 | NF-YB family protein | |
XP_022753905.1 | NF-YB family protein | |
XP_022758913.1 | NF-YB family protein | |
XP_022759705.1 | NF-YB family protein | |
XP_022760556.1 | NF-YB family protein | |
XP_022765319.1 | NF-YB family protein | |
XP_022765320.1 | NF-YB family protein | |
XP_022765321.1 | NF-YB family protein | |
XP_022767419.1 | NF-YB family protein | |
XP_022769783.1 | NF-YB family protein | |
XP_022769789.1 | NF-YB family protein | |
XP_022769797.1 | NF-YB family protein | |
XP_022769805.1 | NF-YB family protein | |
XP_022769812.1 | NF-YB family protein | |
XP_022770952.1 | NF-YB family protein | |
XP_022773810.1 | NF-YB family protein | |
XP_022773861.1 | NF-YB family protein |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982