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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Quercus suber (45) | XP_023871942.1 | GATA family protein |
XP_023871950.1 | GATA family protein | |
XP_023871959.1 | GATA family protein | |
XP_023876649.1 | GATA family protein | |
XP_023877319.1 | GATA family protein | |
XP_023877642.1 | GATA family protein | |
XP_023882045.1 | GATA family protein | |
XP_023883054.1 | GATA family protein | |
XP_023886249.1 | GATA family protein | |
XP_023886728.1 | GATA family protein | |
XP_023888430.1 | GATA family protein | |
XP_023888954.1 | GATA family protein | |
XP_023888955.1 | GATA family protein | |
XP_023891081.1 | GATA family protein | |
XP_023891082.1 | GATA family protein | |
XP_023891083.1 | GATA family protein | |
XP_023891084.1 | GATA family protein | |
XP_023893864.1 | GATA family protein | |
XP_023896349.1 | GATA family protein | |
XP_023896643.1 | GATA family protein | |
XP_023897204.1 | GATA family protein | |
XP_023897210.1 | GATA family protein | |
XP_023897364.1 | GATA family protein | |
XP_023898531.1 | GATA family protein | |
XP_023899662.1 | GATA family protein | |
XP_023902988.1 | GATA family protein | |
XP_023905138.1 | GATA family protein | |
XP_023910728.1 | GATA family protein | |
XP_023911568.1 | GATA family protein | |
XP_023912721.1 | GATA family protein | |
XP_023913533.1 | GATA family protein | |
XP_023914096.1 | GATA family protein | |
XP_023914481.1 | GATA family protein | |
XP_023914482.1 | GATA family protein | |
XP_023914483.1 | GATA family protein | |
XP_023916988.1 | GATA family protein | |
XP_023918306.1 | GATA family protein | |
XP_023922157.1 | GATA family protein | |
XP_023922215.1 | GATA family protein | |
XP_023923049.1 | GATA family protein | |
XP_023923560.1 | GATA family protein | |
XP_023925587.1 | GATA family protein | |
XP_023929202.1 | GATA family protein | |
XP_023929596.1 | GATA family protein | |
XP_023929738.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008