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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Prunus domestica (82) | Pd.00g000250.m01 | GATA family protein |
Pd.00g013380.m01 | GATA family protein | |
Pd.00g014890.m01 | GATA family protein | |
Pd.00g069920.m01 | GATA family protein | |
Pd.00g078020.m01 | GATA family protein | |
Pd.00g093000.m01 | GATA family protein | |
Pd.00g1001630.m01 | GATA family protein | |
Pd.00g1087030.m01 | GATA family protein | |
Pd.00g111070.m01 | GATA family protein | |
Pd.00g1155150.m01 | GATA family protein | |
Pd.00g1161040.m01 | GATA family protein | |
Pd.00g1167830.m01 | GATA family protein | |
Pd.00g1203590.m01 | GATA family protein | |
Pd.00g1203590.m02 | GATA family protein | |
Pd.00g1203620.m01 | GATA family protein | |
Pd.00g1216680.m01 | GATA family protein | |
Pd.00g1235890.m01 | GATA family protein | |
Pd.00g1246320.m01 | GATA family protein | |
Pd.00g1288980.m01 | GATA family protein | |
Pd.00g1288990.m01 | GATA family protein | |
Pd.00g1292720.m01 | GATA family protein | |
Pd.00g137640.m01 | GATA family protein | |
Pd.00g147650.m01 | GATA family protein | |
Pd.00g148460.m01 | GATA family protein | |
Pd.00g152450.m01 | GATA family protein | |
Pd.00g160550.m01 | GATA family protein | |
Pd.00g173070.m01 | GATA family protein | |
Pd.00g278430.m01 | GATA family protein | |
Pd.00g281650.m01 | GATA family protein | |
Pd.00g305800.m01 | GATA family protein | |
Pd.00g325430.m01 | GATA family protein | |
Pd.00g341470.m01 | GATA family protein | |
Pd.00g344600.m01 | GATA family protein | |
Pd.00g344600.m02 | GATA family protein | |
Pd.00g358280.m01 | GATA family protein | |
Pd.00g358290.m01 | GATA family protein | |
Pd.00g358290.m02 | GATA family protein | |
Pd.00g378520.m01 | GATA family protein | |
Pd.00g418790.m01 | GATA family protein | |
Pd.00g424000.m01 | GATA family protein | |
Pd.00g429400.m01 | GATA family protein | |
Pd.00g433140.m01 | GATA family protein | |
Pd.00g433460.m01 | GATA family protein | |
Pd.00g434590.m01 | GATA family protein | |
Pd.00g437060.m01 | GATA family protein | |
Pd.00g458810.m01 | GATA family protein | |
Pd.00g463400.m01 | GATA family protein | |
Pd.00g489400.m01 | GATA family protein | |
Pd.00g519740.m01 | GATA family protein | |
Pd.00g531130.m01 | GATA family protein | |
Pd.00g574950.m01 | GATA family protein | |
Pd.00g597250.m01 | GATA family protein | |
Pd.00g617910.m01 | GATA family protein | |
Pd.00g618740.m01 | GATA family protein | |
Pd.00g620760.m01 | GATA family protein | |
Pd.00g620770.m01 | GATA family protein | |
Pd.00g649900.m01 | GATA family protein | |
Pd.00g653770.m01 | GATA family protein | |
Pd.00g689370.m01 | GATA family protein | |
Pd.00g689370.m02 | GATA family protein | |
Pd.00g689370.m03 | GATA family protein | |
Pd.00g694160.m01 | GATA family protein | |
Pd.00g703280.m01 | GATA family protein | |
Pd.00g744610.m01 | GATA family protein | |
Pd.00g798730.m01 | GATA family protein | |
Pd.00g799470.m01 | GATA family protein | |
Pd.00g803330.m01 | GATA family protein | |
Pd.00g817210.m01 | GATA family protein | |
Pd.00g821730.m01 | GATA family protein | |
Pd.00g821740.m01 | GATA family protein | |
Pd.00g842730.m01 | GATA family protein | |
Pd.00g861690.m01 | GATA family protein | |
Pd.00g878770.m01 | GATA family protein | |
Pd.00g878780.m01 | GATA family protein | |
Pd.00g894830.m01 | GATA family protein | |
Pd.00g897740.m01 | GATA family protein | |
Pd.00g905710.m01 | GATA family protein | |
Pd.00g931130.m01 | GATA family protein | |
Pd.00g954330.m01 | GATA family protein | |
Pd.00g982360.m01 | GATA family protein | |
Pd.00g989310.m01 | GATA family protein | |
Pd.00g989320.m01 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008