PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
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OGLUM01G16180.1 | GATA family protein | |
OGLUM01G29320.1 | GATA family protein | |
OGLUM01G34750.1 | GATA family protein | |
OGLUM01G50190.1 | GATA family protein | |
OGLUM02G03560.1 | GATA family protein | |
OGLUM02G09200.1 | GATA family protein | |
OGLUM02G26320.1 | GATA family protein | |
OGLUM02G26320.2 | GATA family protein | |
OGLUM02G37730.1 | GATA family protein | |
OGLUM02G37730.2 | GATA family protein | |
OGLUM03G02370.1 | GATA family protein | |
OGLUM03G03420.1 | GATA family protein | |
OGLUM03G30120.1 | GATA family protein | |
OGLUM03G32890.1 | GATA family protein | |
OGLUM03G39650.1 | GATA family protein | |
OGLUM04G20120.1 | GATA family protein | |
OGLUM04G20120.2 | GATA family protein | |
OGLUM04G20450.1 | GATA family protein | |
OGLUM05G03850.1 | GATA family protein | |
OGLUM05G24390.1 | GATA family protein | |
OGLUM05G27770.1 | GATA family protein | |
OGLUM05G28510.1 | GATA family protein | |
OGLUM06G20240.1 | GATA family protein | |
OGLUM06G20240.2 | GATA family protein | |
OGLUM06G20240.4 | GATA family protein | |
OGLUM06G27650.1 | GATA family protein | |
OGLUM10G12070.1 | GATA family protein | |
OGLUM10G18330.1 | GATA family protein | |
OGLUM11G05230.1 | GATA family protein | |
OGLUM11G17080.1 | GATA family protein | |
OGLUM12G04960.1 | GATA family protein | |
OGLUM12G21080.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008