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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Oeu001280.1 | GATA family protein | |
Oeu001890.1 | GATA family protein | |
Oeu004824.1 | GATA family protein | |
Oeu006436.1 | GATA family protein | |
Oeu006972.1 | GATA family protein | |
Oeu007403.1 | GATA family protein | |
Oeu008603.2 | GATA family protein | |
Oeu009619.1 | GATA family protein | |
Oeu010021.1 | GATA family protein | |
Oeu010522.1 | GATA family protein | |
Oeu012598.1 | GATA family protein | |
Oeu013467.1 | GATA family protein | |
Oeu014200.1 | GATA family protein | |
Oeu016477.1 | GATA family protein | |
Oeu017208.1 | GATA family protein | |
Oeu017655.1 | GATA family protein | |
Oeu023759.3 | GATA family protein | |
Oeu029799.1 | GATA family protein | |
Oeu031100.1 | GATA family protein | |
Oeu031344.1 | GATA family protein | |
Oeu031695.1 | GATA family protein | |
Oeu033647.1 | GATA family protein | |
Oeu033861.1 | GATA family protein | |
Oeu033895.1 | GATA family protein | |
Oeu037727.1 | GATA family protein | |
Oeu037867.1 | GATA family protein | |
Oeu038807.1 | GATA family protein | |
Oeu042267.1 | GATA family protein | |
Oeu042649.1 | GATA family protein | |
Oeu043887.1 | GATA family protein | |
Oeu046137.1 | GATA family protein | |
Oeu048400.1 | GATA family protein | |
Oeu049644.1 | GATA family protein | |
Oeu050606.1 | GATA family protein | |
Oeu053691.1 | GATA family protein | |
Oeu054102.1 | GATA family protein | |
Oeu054280.1 | GATA family protein | |
Oeu054774.2 | GATA family protein | |
Oeu061622.1 | GATA family protein | |
Oeu063201.1 | GATA family protein | |
Oeu063546.2 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008