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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
OIV89729 | GATA family protein | |
OIV91366 | GATA family protein | |
OIV92711 | GATA family protein | |
OIV92793 | GATA family protein | |
OIV93376 | GATA family protein | |
OIV94087 | GATA family protein | |
OIV94566 | GATA family protein | |
OIV94631 | GATA family protein | |
OIV94794 | GATA family protein | |
OIV94824 | GATA family protein | |
OIV96646 | GATA family protein | |
OIV97394 | GATA family protein | |
OIV97687 | GATA family protein | |
OIV97807 | GATA family protein | |
OIV97842 | GATA family protein | |
OIV98677 | GATA family protein | |
OIV98696 | GATA family protein | |
OIV99329 | GATA family protein | |
OIV99515 | GATA family protein | |
OIV99760 | GATA family protein | |
OIW01449 | GATA family protein | |
OIW02538 | GATA family protein | |
OIW03313 | GATA family protein | |
OIW04321 | GATA family protein | |
OIW04323 | GATA family protein | |
OIW05811 | GATA family protein | |
OIW06722 | GATA family protein | |
OIW07684 | GATA family protein | |
OIW08736 | GATA family protein | |
OIW09139 | GATA family protein | |
OIW10856 | GATA family protein | |
OIW11006 | GATA family protein | |
OIW11025 | GATA family protein | |
OIW13733 | GATA family protein | |
OIW14408 | GATA family protein | |
OIW14411 | GATA family protein | |
OIW14559 | GATA family protein | |
OIW14560 | GATA family protein | |
OIW15343 | GATA family protein | |
OIW15774 | GATA family protein | |
OIW17009 | GATA family protein | |
OIW17155 | GATA family protein | |
OIW17684 | GATA family protein | |
OIW18400 | GATA family protein | |
OIW20063 | GATA family protein | |
OIW21296 | GATA family protein | |
OIW21870 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008