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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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RWV77029.1 | GATA family protein | |
RWV81060.1 | GATA family protein | |
RWV83266.1 | GATA family protein | |
RWV83884.1 | GATA family protein | |
RWV85191.1 | GATA family protein | |
RWV86701.1 | GATA family protein | |
RWV88656.1 | GATA family protein | |
RWV89288.1 | GATA family protein | |
RWV90099.1 | GATA family protein | |
RWV94213.1 | GATA family protein | |
RWV94827.1 | GATA family protein | |
RWV98653.1 | GATA family protein | |
RWW01600.1 | GATA family protein | |
RWW03027.1 | GATA family protein | |
RWW04595.1 | GATA family protein | |
RWW06850.1 | GATA family protein | |
RWW09005.1 | GATA family protein | |
RWW11854.1 | GATA family protein | |
RWW12165.1 | GATA family protein | |
RWW13511.1 | GATA family protein | |
RWW14570.1 | GATA family protein | |
RWW15094.1 | GATA family protein | |
RWW15124.1 | GATA family protein | |
RWW16713.1 | GATA family protein | |
RWW18077.1 | GATA family protein | |
RWW18595.1 | GATA family protein | |
RWW18640.1 | GATA family protein | |
RWW18816.1 | GATA family protein | |
RWW19269.1 | GATA family protein | |
RWW20260.1 | GATA family protein | |
RWW21202.1 | GATA family protein | |
RWW27070.1 | GATA family protein | |
RWW27832.1 | GATA family protein | |
RWW28190.1 | GATA family protein | |
RWW28432.1 | GATA family protein | |
RWW29458.1 | GATA family protein | |
RWW29949.1 | GATA family protein | |
RWW30198.1 | GATA family protein | |
RWW30204.1 | GATA family protein | |
RWW32462.1 | GATA family protein | |
RWW32664.1 | GATA family protein | |
RWW33274.1 | GATA family protein | |
RWW34451.1 | GATA family protein | |
RWW34954.1 | GATA family protein | |
RWW34971.1 | GATA family protein | |
RWW34986.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008