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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Durio zibethinus (120) | XP_022716360.1 | GATA family protein |
XP_022716361.1 | GATA family protein | |
XP_022718406.1 | GATA family protein | |
XP_022718417.1 | GATA family protein | |
XP_022719260.1 | GATA family protein | |
XP_022719261.1 | GATA family protein | |
XP_022720134.1 | GATA family protein | |
XP_022721096.1 | GATA family protein | |
XP_022722673.1 | GATA family protein | |
XP_022722855.1 | GATA family protein | |
XP_022722856.1 | GATA family protein | |
XP_022722857.1 | GATA family protein | |
XP_022724751.1 | GATA family protein | |
XP_022726786.1 | GATA family protein | |
XP_022728763.1 | GATA family protein | |
XP_022729090.1 | GATA family protein | |
XP_022729170.1 | GATA family protein | |
XP_022729260.1 | GATA family protein | |
XP_022729380.1 | GATA family protein | |
XP_022729541.1 | GATA family protein | |
XP_022729627.1 | GATA family protein | |
XP_022729742.1 | GATA family protein | |
XP_022729827.1 | GATA family protein | |
XP_022730547.1 | GATA family protein | |
XP_022730986.1 | GATA family protein | |
XP_022731090.1 | GATA family protein | |
XP_022731735.1 | GATA family protein | |
XP_022734500.1 | GATA family protein | |
XP_022734501.1 | GATA family protein | |
XP_022734502.1 | GATA family protein | |
XP_022736242.1 | GATA family protein | |
XP_022736243.1 | GATA family protein | |
XP_022736244.1 | GATA family protein | |
XP_022741158.1 | GATA family protein | |
XP_022741213.1 | GATA family protein | |
XP_022744744.1 | GATA family protein | |
XP_022744745.1 | GATA family protein | |
XP_022744752.1 | GATA family protein | |
XP_022744765.1 | GATA family protein | |
XP_022744776.1 | GATA family protein | |
XP_022744785.1 | GATA family protein | |
XP_022745166.1 | GATA family protein | |
XP_022745167.1 | GATA family protein | |
XP_022745168.1 | GATA family protein | |
XP_022747098.1 | GATA family protein | |
XP_022747637.1 | GATA family protein | |
XP_022747648.1 | GATA family protein | |
XP_022747843.1 | GATA family protein | |
XP_022747844.1 | GATA family protein | |
XP_022747845.1 | GATA family protein | |
XP_022747846.1 | GATA family protein | |
XP_022748203.1 | GATA family protein | |
XP_022749051.1 | GATA family protein | |
XP_022752139.1 | GATA family protein | |
XP_022752215.1 | GATA family protein | |
XP_022752253.1 | GATA family protein | |
XP_022753673.1 | GATA family protein | |
XP_022753870.1 | GATA family protein | |
XP_022755630.1 | GATA family protein | |
XP_022756352.1 | GATA family protein | |
XP_022758156.1 | GATA family protein | |
XP_022758165.1 | GATA family protein | |
XP_022758174.1 | GATA family protein | |
XP_022759495.1 | GATA family protein | |
XP_022759680.1 | GATA family protein | |
XP_022761254.1 | GATA family protein | |
XP_022761255.1 | GATA family protein | |
XP_022761983.1 | GATA family protein | |
XP_022762097.1 | GATA family protein | |
XP_022763189.1 | GATA family protein | |
XP_022763628.1 | GATA family protein | |
XP_022763629.1 | GATA family protein | |
XP_022763631.1 | GATA family protein | |
XP_022763632.1 | GATA family protein | |
XP_022763633.1 | GATA family protein | |
XP_022763636.1 | GATA family protein | |
XP_022763637.1 | GATA family protein | |
XP_022763638.1 | GATA family protein | |
XP_022763639.1 | GATA family protein | |
XP_022763643.1 | GATA family protein | |
XP_022765371.1 | GATA family protein | |
XP_022765372.1 | GATA family protein | |
XP_022765373.1 | GATA family protein | |
XP_022768473.1 | GATA family protein | |
XP_022768474.1 | GATA family protein | |
XP_022768475.1 | GATA family protein | |
XP_022768476.1 | GATA family protein | |
XP_022768477.1 | GATA family protein | |
XP_022768478.1 | GATA family protein | |
XP_022768479.1 | GATA family protein | |
XP_022768480.1 | GATA family protein | |
XP_022768481.1 | GATA family protein | |
XP_022773032.1 | GATA family protein | |
XP_022773033.1 | GATA family protein | |
XP_022773034.1 | GATA family protein | |
XP_022773036.1 | GATA family protein | |
XP_022773037.1 | GATA family protein | |
XP_022773038.1 | GATA family protein | |
XP_022773039.1 | GATA family protein | |
XP_022773040.1 | GATA family protein | |
XP_022773041.1 | GATA family protein | |
XP_022773042.1 | GATA family protein | |
XP_022773043.1 | GATA family protein | |
XP_022773044.1 | GATA family protein | |
XP_022773045.1 | GATA family protein | |
XP_022773046.1 | GATA family protein | |
XP_022773047.1 | GATA family protein | |
XP_022773048.1 | GATA family protein | |
XP_022773049.1 | GATA family protein | |
XP_022773050.1 | GATA family protein | |
XP_022773051.1 | GATA family protein | |
XP_022773052.1 | GATA family protein | |
XP_022773053.1 | GATA family protein | |
XP_022773054.1 | GATA family protein | |
XP_022773055.1 | GATA family protein | |
XP_022773056.1 | GATA family protein | |
XP_022773057.1 | GATA family protein | |
XP_022773992.1 | GATA family protein | |
XP_022775384.1 | GATA family protein | |
XP_022777190.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008