PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Citrus unshiu (31) | GAY35773.1 | GATA family protein |
GAY38381.1 | GATA family protein | |
GAY39902.1 | GATA family protein | |
GAY41031.1 | GATA family protein | |
GAY41899.1 | GATA family protein | |
GAY42407.1 | GATA family protein | |
GAY42700.1 | GATA family protein | |
GAY46480.1 | GATA family protein | |
GAY46481.1 | GATA family protein | |
GAY48142.1 | GATA family protein | |
GAY48143.1 | GATA family protein | |
GAY48144.1 | GATA family protein | |
GAY48145.1 | GATA family protein | |
GAY48146.1 | GATA family protein | |
GAY48343.1 | GATA family protein | |
GAY49952.1 | GATA family protein | |
GAY49953.1 | GATA family protein | |
GAY52869.1 | GATA family protein | |
GAY56151.1 | GATA family protein | |
GAY56375.1 | GATA family protein | |
GAY57062.1 | GATA family protein | |
GAY57063.1 | GATA family protein | |
GAY57064.1 | GATA family protein | |
GAY57065.1 | GATA family protein | |
GAY57659.1 | GATA family protein | |
GAY57660.1 | GATA family protein | |
GAY62164.1 | GATA family protein | |
GAY62165.1 | GATA family protein | |
GAY62972.1 | GATA family protein | |
GAY64921.1 | GATA family protein | |
GAY64923.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008