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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Cucurbita maxima (76) | XP_022966932.1 | GATA family protein |
XP_022966933.1 | GATA family protein | |
XP_022967871.1 | GATA family protein | |
XP_022967879.1 | GATA family protein | |
XP_022971837.1 | GATA family protein | |
XP_022971916.1 | GATA family protein | |
XP_022971917.1 | GATA family protein | |
XP_022971918.1 | GATA family protein | |
XP_022972130.1 | GATA family protein | |
XP_022972249.1 | GATA family protein | |
XP_022975215.1 | GATA family protein | |
XP_022975216.1 | GATA family protein | |
XP_022975217.1 | GATA family protein | |
XP_022975219.1 | GATA family protein | |
XP_022976322.1 | GATA family protein | |
XP_022977482.1 | GATA family protein | |
XP_022977881.1 | GATA family protein | |
XP_022977883.1 | GATA family protein | |
XP_022978554.1 | GATA family protein | |
XP_022979622.1 | GATA family protein | |
XP_022979974.1 | GATA family protein | |
XP_022982306.1 | GATA family protein | |
XP_022982396.1 | GATA family protein | |
XP_022985049.1 | GATA family protein | |
XP_022985849.1 | GATA family protein | |
XP_022986562.1 | GATA family protein | |
XP_022986563.1 | GATA family protein | |
XP_022986564.1 | GATA family protein | |
XP_022987811.1 | GATA family protein | |
XP_022987812.1 | GATA family protein | |
XP_022987813.1 | GATA family protein | |
XP_022987814.1 | GATA family protein | |
XP_022987815.1 | GATA family protein | |
XP_022987816.1 | GATA family protein | |
XP_022988859.1 | GATA family protein | |
XP_022989484.1 | GATA family protein | |
XP_022990420.1 | GATA family protein | |
XP_022992334.1 | GATA family protein | |
XP_022992341.1 | GATA family protein | |
XP_022992342.1 | GATA family protein | |
XP_022992343.1 | GATA family protein | |
XP_022992344.1 | GATA family protein | |
XP_022992345.1 | GATA family protein | |
XP_022992346.1 | GATA family protein | |
XP_022993356.1 | GATA family protein | |
XP_022993357.1 | GATA family protein | |
XP_022995555.1 | GATA family protein | |
XP_022996578.1 | GATA family protein | |
XP_022997186.1 | GATA family protein | |
XP_022997187.1 | GATA family protein | |
XP_022997231.1 | GATA family protein | |
XP_022997862.1 | GATA family protein | |
XP_022999961.1 | GATA family protein | |
XP_022999962.1 | GATA family protein | |
XP_022999963.1 | GATA family protein | |
XP_022999964.1 | GATA family protein | |
XP_023000371.1 | GATA family protein | |
XP_023000537.1 | GATA family protein | |
XP_023001862.1 | GATA family protein | |
XP_023001863.1 | GATA family protein | |
XP_023001864.1 | GATA family protein | |
XP_023001865.1 | GATA family protein | |
XP_023001866.1 | GATA family protein | |
XP_023001872.1 | GATA family protein | |
XP_023001873.1 | GATA family protein | |
XP_023002390.1 | GATA family protein | |
XP_023003838.1 | GATA family protein | |
XP_023004687.1 | GATA family protein | |
XP_023005379.1 | GATA family protein | |
XP_023005380.1 | GATA family protein | |
XP_023006311.1 | GATA family protein | |
XP_023006312.1 | GATA family protein | |
XP_023006466.1 | GATA family protein | |
XP_023007305.1 | GATA family protein | |
XP_023007306.1 | GATA family protein | |
XP_023007779.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008