PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
XP_024959638.1 | GATA family protein | |
XP_024960152.1 | GATA family protein | |
XP_024961421.1 | GATA family protein | |
XP_024962043.1 | GATA family protein | |
XP_024962965.1 | GATA family protein | |
XP_024968394.1 | GATA family protein | |
XP_024968412.1 | GATA family protein | |
XP_024968413.1 | GATA family protein | |
XP_024968438.1 | GATA family protein | |
XP_024969857.1 | GATA family protein | |
XP_024970015.1 | GATA family protein | |
XP_024970068.1 | GATA family protein | |
XP_024970069.1 | GATA family protein | |
XP_024970508.1 | GATA family protein | |
XP_024970509.1 | GATA family protein | |
XP_024973167.1 | GATA family protein | |
XP_024973483.1 | GATA family protein | |
XP_024975662.1 | GATA family protein | |
XP_024975663.1 | GATA family protein | |
XP_024978864.1 | GATA family protein | |
XP_024979613.1 | GATA family protein | |
XP_024980176.1 | GATA family protein | |
XP_024983644.1 | GATA family protein | |
XP_024984260.1 | GATA family protein | |
XP_024986422.1 | GATA family protein | |
XP_024986450.1 | GATA family protein | |
XP_024986453.1 | GATA family protein | |
XP_024986841.1 | GATA family protein | |
XP_024987002.1 | GATA family protein | |
XP_024988476.1 | GATA family protein | |
XP_024990766.1 | GATA family protein | |
XP_024991678.1 | GATA family protein | |
XP_024994193.1 | GATA family protein | |
XP_024994194.1 | GATA family protein | |
XP_024994269.1 | GATA family protein | |
XP_024996188.1 | GATA family protein | |
XP_024996912.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008