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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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PHT97735.1 | GATA family protein | |
PHT97737.1 | GATA family protein | |
PHT98664.1 | GATA family protein | |
PHT98665.1 | GATA family protein | |
PHT99008.1 | GATA family protein | |
PHT99148.1 | GATA family protein | |
PHU01738.1 | GATA family protein | |
PHU03871.1 | GATA family protein | |
PHU08141.1 | GATA family protein | |
PHU08418.1 | GATA family protein | |
PHU09271.1 | GATA family protein | |
PHU10674.1 | GATA family protein | |
PHU15852.1 | GATA family protein | |
PHU16850.1 | GATA family protein | |
PHU18261.1 | GATA family protein | |
PHU18493.1 | GATA family protein | |
PHU18494.1 | GATA family protein | |
PHU18722.1 | GATA family protein | |
PHU19384.1 | GATA family protein | |
PHU20530.1 | GATA family protein | |
PHU20531.1 | GATA family protein | |
PHU21457.1 | GATA family protein | |
PHU24359.1 | GATA family protein | |
PHU25027.1 | GATA family protein | |
PHU27036.1 | GATA family protein | |
PHU27103.1 | GATA family protein | |
PHU28563.1 | GATA family protein | |
PHU31040.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008