![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
OMO50806 | GATA family protein | |
OMO50807 | GATA family protein | |
OMO53576 | GATA family protein | |
OMO56910 | GATA family protein | |
OMO57005 | GATA family protein | |
OMO57237 | GATA family protein | |
OMO62333 | GATA family protein | |
OMO63931 | GATA family protein | |
OMO66918 | GATA family protein | |
OMO67310 | GATA family protein | |
OMO67422 | GATA family protein | |
OMO69528 | GATA family protein | |
OMO74381 | GATA family protein | |
OMO76114 | GATA family protein | |
OMO85251 | GATA family protein | |
OMO85252 | GATA family protein | |
OMO91858 | GATA family protein | |
OMO95769 | GATA family protein | |
OMO96220 | GATA family protein | |
OMO96713 | GATA family protein | |
OMO99318 | GATA family protein | |
OMP11703 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008