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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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PHT29060.1 | GATA family protein | |
PHT31937.1 | GATA family protein | |
PHT33179.1 | GATA family protein | |
PHT33692.1 | GATA family protein | |
PHT35148.1 | GATA family protein | |
PHT36316.1 | GATA family protein | |
PHT38527.1 | GATA family protein | |
PHT39767.1 | GATA family protein | |
PHT40673.1 | GATA family protein | |
PHT41667.1 | GATA family protein | |
PHT42003.1 | GATA family protein | |
PHT42007.1 | GATA family protein | |
PHT42010.1 | GATA family protein | |
PHT45526.1 | GATA family protein | |
PHT46867.1 | GATA family protein | |
PHT47039.1 | GATA family protein | |
PHT48740.1 | GATA family protein | |
PHT49099.1 | GATA family protein | |
PHT49100.1 | GATA family protein | |
PHT49198.1 | GATA family protein | |
PHT49766.1 | GATA family protein | |
PHT50847.1 | GATA family protein | |
PHT50848.1 | GATA family protein | |
PHT52118.1 | GATA family protein | |
PHT54177.1 | GATA family protein | |
PHT54666.1 | GATA family protein | |
PHT56584.1 | GATA family protein | |
PHT56587.1 | GATA family protein | |
PHT58416.1 | GATA family protein | |
PHT59061.1 | GATA family protein | |
PHT60695.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008