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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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XP_027329890.1 | GATA family protein | |
XP_027329891.1 | GATA family protein | |
XP_027331338.1 | GATA family protein | |
XP_027332314.1 | GATA family protein | |
XP_027333048.1 | GATA family protein | |
XP_027334497.1 | GATA family protein | |
XP_027335245.1 | GATA family protein | |
XP_027337781.1 | GATA family protein | |
XP_027339285.1 | GATA family protein | |
XP_027340338.1 | GATA family protein | |
XP_027340339.1 | GATA family protein | |
XP_027344682.1 | GATA family protein | |
XP_027344858.1 | GATA family protein | |
XP_027344859.1 | GATA family protein | |
XP_027345945.1 | GATA family protein | |
XP_027345946.1 | GATA family protein | |
XP_027345947.1 | GATA family protein | |
XP_027345948.1 | GATA family protein | |
XP_027345949.1 | GATA family protein | |
XP_027345950.1 | GATA family protein | |
XP_027345951.1 | GATA family protein | |
XP_027346166.1 | GATA family protein | |
XP_027346167.1 | GATA family protein | |
XP_027346168.1 | GATA family protein | |
XP_027346169.1 | GATA family protein | |
XP_027347250.1 | GATA family protein | |
XP_027348452.1 | GATA family protein | |
XP_027352729.1 | GATA family protein | |
XP_027352829.1 | GATA family protein | |
XP_027354476.1 | GATA family protein | |
XP_027354477.1 | GATA family protein | |
XP_027354953.1 | GATA family protein | |
XP_027355211.1 | GATA family protein | |
XP_027355212.1 | GATA family protein | |
XP_027355680.1 | GATA family protein | |
XP_027355681.1 | GATA family protein | |
XP_027356291.1 | GATA family protein | |
XP_027359174.1 | GATA family protein | |
XP_027359175.1 | GATA family protein | |
XP_027360178.1 | GATA family protein | |
XP_027361291.1 | GATA family protein | |
XP_027361740.1 | GATA family protein | |
XP_027361741.1 | GATA family protein | |
XP_027362682.1 | GATA family protein | |
XP_027363911.1 | GATA family protein | |
XP_027363912.1 | GATA family protein | |
XP_027363961.1 | GATA family protein | |
XP_027363962.1 | GATA family protein | |
XP_027368977.1 | GATA family protein | |
XP_027368978.1 | GATA family protein | |
XP_027368979.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008