PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Zea mays (54) | AC184831.3_FGP005 | GATA family protein |
AC184831.3_FGP008 | GATA family protein | |
AC194965.4_FGP004 | GATA family protein | |
AC202864.3_FGP002 | GATA family protein | |
GRMZM2G009530_P01 | GATA family protein | |
GRMZM2G025002_P01 | GATA family protein | |
GRMZM2G031983_P01 | GATA family protein | |
GRMZM2G039586_P01 | GATA family protein | |
GRMZM2G044576_P01 | GATA family protein | |
GRMZM2G048850_P01 | GATA family protein | |
GRMZM2G052616_P01 | GATA family protein | |
GRMZM2G054615_P01 | GATA family protein | |
GRMZM2G054615_P02 | GATA family protein | |
GRMZM2G058479_P01 | GATA family protein | |
GRMZM2G058479_P02 | GATA family protein | |
GRMZM2G065896_P01 | GATA family protein | |
GRMZM2G067171_P01 | GATA family protein | |
GRMZM2G077002_P01 | GATA family protein | |
GRMZM2G080509_P01 | GATA family protein | |
GRMZM2G080509_P02 | GATA family protein | |
GRMZM2G101058_P01 | GATA family protein | |
GRMZM2G104390_P01 | GATA family protein | |
GRMZM2G110295_P01 | GATA family protein | |
GRMZM2G113098_P01 | GATA family protein | |
GRMZM2G114775_P01 | GATA family protein | |
GRMZM2G114775_P02 | GATA family protein | |
GRMZM2G118214_P01 | GATA family protein | |
GRMZM2G118214_P02 | GATA family protein | |
GRMZM2G123909_P01 | GATA family protein | |
GRMZM2G135381_P01 | GATA family protein | |
GRMZM2G138967_P01 | GATA family protein | |
GRMZM2G140669_P01 | GATA family protein | |
GRMZM2G163200_P01 | GATA family protein | |
GRMZM2G163200_P02 | GATA family protein | |
GRMZM2G163200_P03 | GATA family protein | |
GRMZM2G163200_P04 | GATA family protein | |
GRMZM2G324131_P01 | GATA family protein | |
GRMZM2G325850_P01 | GATA family protein | |
GRMZM2G379005_P01 | GATA family protein | |
GRMZM2G379005_P02 | GATA family protein | |
GRMZM2G379005_P03 | GATA family protein | |
GRMZM2G379005_P04 | GATA family protein | |
GRMZM2G379005_P05 | GATA family protein | |
GRMZM2G396451_P01 | GATA family protein | |
GRMZM2G396451_P02 | GATA family protein | |
GRMZM2G397616_P01 | GATA family protein | |
GRMZM2G404973_P01 | GATA family protein | |
GRMZM2G404973_P02 | GATA family protein | |
GRMZM2G404973_P03 | GATA family protein | |
GRMZM2G421212_P01 | GATA family protein | |
GRMZM2G464037_P01 | GATA family protein | |
GRMZM2G532534_P01 | GATA family protein | |
GRMZM5G879778_P01 | GATA family protein | |
GRMZM5G887975_P01 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008