PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Sesamum indicum (36) | XP_011070264.1 | GATA family protein |
XP_011072418.1 | GATA family protein | |
XP_011072744.1 | GATA family protein | |
XP_011073745.1 | GATA family protein | |
XP_011073746.1 | GATA family protein | |
XP_011076972.1 | GATA family protein | |
XP_011076974.1 | GATA family protein | |
XP_011078200.1 | GATA family protein | |
XP_011079598.1 | GATA family protein | |
XP_011079599.1 | GATA family protein | |
XP_011080229.1 | GATA family protein | |
XP_011081778.1 | GATA family protein | |
XP_011082433.1 | GATA family protein | |
XP_011084325.1 | GATA family protein | |
XP_011087961.1 | GATA family protein | |
XP_011087962.1 | GATA family protein | |
XP_011087963.1 | GATA family protein | |
XP_011088480.1 | GATA family protein | |
XP_011088777.1 | GATA family protein | |
XP_011089286.1 | GATA family protein | |
XP_011089919.1 | GATA family protein | |
XP_011089920.1 | GATA family protein | |
XP_011090119.1 | GATA family protein | |
XP_011090418.1 | GATA family protein | |
XP_011091388.1 | GATA family protein | |
XP_011092007.1 | GATA family protein | |
XP_011092456.1 | GATA family protein | |
XP_011092458.1 | GATA family protein | |
XP_011092459.1 | GATA family protein | |
XP_011092460.1 | GATA family protein | |
XP_011093726.1 | GATA family protein | |
XP_011097106.1 | GATA family protein | |
XP_011099620.1 | GATA family protein | |
XP_011100134.1 | GATA family protein | |
XP_011100810.1 | GATA family protein | |
XP_011100952.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008