PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Ricinus communis (62) | 27763.m000042 | MYB family protein |
27798.m000612 | MYB family protein | |
27956.m000359 | MYB family protein | |
28154.m000040 | MYB family protein | |
28226.m000839 | MYB family protein | |
28271.m000023 | MYB family protein | |
28288.m000014 | MYB family protein | |
28489.m000045 | MYB family protein | |
28603.m000172 | MYB family protein | |
28838.m000246 | MYB family protein | |
29602.m000218 | MYB family protein | |
29610.m000410 | MYB family protein | |
29628.m000773 | MYB family protein | |
29654.m000304 | MYB family protein | |
29656.m000479 | MYB family protein | |
29680.m001688 | MYB family protein | |
29681.m001296 | MYB family protein | |
29681.m001315 | MYB family protein | |
29686.m000890 | MYB family protein | |
29736.m002013 | MYB family protein | |
29739.m003784 | MYB family protein | |
29767.m000199 | MYB family protein | |
29785.m000932 | MYB family protein | |
29788.m000340 | MYB family protein | |
29794.m003447 | MYB family protein | |
29801.m003096 | MYB family protein | |
29813.m001506 | MYB family protein | |
29814.m000736 | MYB family protein | |
29818.m000395 | MYB family protein | |
29823.m000215 | MYB family protein | |
29846.m000184 | MYB family protein | |
29917.m001977 | MYB family protein | |
29917.m001986 | MYB family protein | |
29929.m004749 | MYB family protein | |
29933.m001453 | MYB family protein | |
29933.m001454 | MYB family protein | |
29970.m000987 | MYB family protein | |
29983.m003281 | MYB family protein | |
30000.m000380 | MYB family protein | |
30054.m000809 | MYB family protein | |
30055.m001589 | MYB family protein | |
30064.m000484 | MYB family protein | |
30068.m002544 | MYB family protein | |
30076.m004607 | MYB family protein | |
30125.m001257 | MYB family protein | |
30128.m008730 | MYB family protein | |
30131.m007263 | MYB family protein | |
30137.m000436 | MYB family protein | |
30138.m004082 | MYB family protein | |
30147.m013885 | MYB family protein | |
30147.m013937 | MYB family protein | |
30167.m000852 | MYB family protein | |
30169.m006322 | MYB family protein | |
30170.m013698 | MYB family protein | |
30170.m013927 | MYB family protein | |
30174.m008717 | MYB family protein | |
30174.m008784 | MYB family protein | |
30174.m009001 | MYB family protein | |
30190.m011004 | MYB family protein | |
30190.m011160 | MYB family protein | |
30190.m011268 | MYB family protein | |
30225.m001689 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504