PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Prunus persica (31) | Prupe.1G126000.1.p | GATA family protein |
Prupe.1G412000.1.p | GATA family protein | |
Prupe.1G447300.1.p | GATA family protein | |
Prupe.1G447400.1.p | GATA family protein | |
Prupe.1G534300.1.p | GATA family protein | |
Prupe.1G534400.1.p | GATA family protein | |
Prupe.2G135400.1.p | GATA family protein | |
Prupe.2G212900.1.p | GATA family protein | |
Prupe.2G212900.2.p | GATA family protein | |
Prupe.3G019800.1.p | GATA family protein | |
Prupe.3G019800.2.p | GATA family protein | |
Prupe.3G019800.3.p | GATA family protein | |
Prupe.3G060900.1.p | GATA family protein | |
Prupe.5G058300.1.p | GATA family protein | |
Prupe.5G058300.2.p | GATA family protein | |
Prupe.5G058300.3.p | GATA family protein | |
Prupe.6G102900.1.p | GATA family protein | |
Prupe.6G102900.2.p | GATA family protein | |
Prupe.6G316000.1.p | GATA family protein | |
Prupe.7G155400.1.p | GATA family protein | |
Prupe.7G164500.1.p | GATA family protein | |
Prupe.7G210100.1.p | GATA family protein | |
Prupe.8G071200.1.p | GATA family protein | |
Prupe.8G071200.2.p | GATA family protein | |
Prupe.8G071200.3.p | GATA family protein | |
Prupe.8G071300.1.p | GATA family protein | |
Prupe.8G071300.2.p | GATA family protein | |
Prupe.8G071300.3.p | GATA family protein | |
Prupe.8G071300.4.p | GATA family protein | |
Prupe.8G086100.1.p | GATA family protein | |
Prupe.8G268900.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008