PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Pbr001138.1 | GATA family protein | |
Pbr002467.1 | GATA family protein | |
Pbr003297.1 | GATA family protein | |
Pbr003531.1 | GATA family protein | |
Pbr004097.1 | GATA family protein | |
Pbr004761.1 | GATA family protein | |
Pbr005051.1 | GATA family protein | |
Pbr006028.1 | GATA family protein | |
Pbr006031.1 | GATA family protein | |
Pbr007018.1 | GATA family protein | |
Pbr008403.1 | GATA family protein | |
Pbr008788.1 | GATA family protein | |
Pbr009877.1 | GATA family protein | |
Pbr011990.1 | GATA family protein | |
Pbr013757.1 | GATA family protein | |
Pbr014317.1 | GATA family protein | |
Pbr015599.1 | GATA family protein | |
Pbr019135.1 | GATA family protein | |
Pbr019838.1 | GATA family protein | |
Pbr022143.1 | GATA family protein | |
Pbr022166.2 | GATA family protein | |
Pbr022349.1 | GATA family protein | |
Pbr024079.1 | GATA family protein | |
Pbr029429.1 | GATA family protein | |
Pbr031829.1 | GATA family protein | |
Pbr032064.1 | GATA family protein | |
Pbr036766.1 | GATA family protein | |
Pbr039067.1 | GATA family protein | |
Pbr040546.1 | GATA family protein | |
Pbr041453.1 | GATA family protein | |
Pbr042397.1 | GATA family protein | |
Pbr042610.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008