PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Oryza nivara (31) | ONIVA01G28750.1 | GATA family protein |
ONIVA01G34990.1 | GATA family protein | |
ONIVA01G52080.1 | GATA family protein | |
ONIVA02G03810.1 | GATA family protein | |
ONIVA02G28320.1 | GATA family protein | |
ONIVA02G38990.1 | GATA family protein | |
ONIVA03G03270.1 | GATA family protein | |
ONIVA03G05970.1 | GATA family protein | |
ONIVA03G31130.1 | GATA family protein | |
ONIVA03G34920.1 | GATA family protein | |
ONIVA03G41600.1 | GATA family protein | |
ONIVA04G04160.1 | GATA family protein | |
ONIVA04G18420.1 | GATA family protein | |
ONIVA04G18420.2 | GATA family protein | |
ONIVA04G18740.1 | GATA family protein | |
ONIVA05G04240.1 | GATA family protein | |
ONIVA05G29020.1 | GATA family protein | |
ONIVA06G22870.1 | GATA family protein | |
ONIVA06G22870.2 | GATA family protein | |
ONIVA06G22870.3 | GATA family protein | |
ONIVA06G28780.1 | GATA family protein | |
ONIVA07G07670.1 | GATA family protein | |
ONIVA10G11610.1 | GATA family protein | |
ONIVA10G13440.1 | GATA family protein | |
ONIVA10G20780.1 | GATA family protein | |
ONIVA11G03260.1 | GATA family protein | |
ONIVA11G05790.1 | GATA family protein | |
ONIVA12G03860.1 | GATA family protein | |
ONIVA12G03860.2 | GATA family protein | |
ONIVA12G18290.1 | GATA family protein | |
ONIVA12G18290.2 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008