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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Oryza glaberrima (26) | ORGLA01G0110000.1 | Trihelix family protein |
ORGLA01G0214300.1 | Trihelix family protein | |
ORGLA02G0003500.1 | Trihelix family protein | |
ORGLA02G0051600.1 | Trihelix family protein | |
ORGLA02G0156500.1 | Trihelix family protein | |
ORGLA02G0167800.1 | Trihelix family protein | |
ORGLA02G0169300.1 | Trihelix family protein | |
ORGLA02G0180100.1 | Trihelix family protein | |
ORGLA02G0222200.1 | Trihelix family protein | |
ORGLA03G0008300.1 | Trihelix family protein | |
ORGLA03G0132100.1 | Trihelix family protein | |
ORGLA03G0132200.1 | Trihelix family protein | |
ORGLA03G0265300.1 | Trihelix family protein | |
ORGLA04G0080100.1 | Trihelix family protein | |
ORGLA04G0137200.1 | Trihelix family protein | |
ORGLA04G0173400.1 | Trihelix family protein | |
ORGLA04G0174800.1 | Trihelix family protein | |
ORGLA04G0207300.1 | Trihelix family protein | |
ORGLA04G0254300.1 | Trihelix family protein | |
ORGLA04G0277700.1 | Trihelix family protein | |
ORGLA05G0221200.1 | Trihelix family protein | |
ORGLA08G0161200.1 | Trihelix family protein | |
ORGLA09G0156000.1 | Trihelix family protein | |
ORGLA10G0139200.1 | Trihelix family protein | |
ORGLA11G0038200.1 | Trihelix family protein | |
ORGLA12G0037600.1 | Trihelix family protein |
GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes (Liu et al. 1999;Zhou 1999).
Fang Y, Xie K, Hou X, Hu H, Xiong L.
Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.
Mol Genet Genomics, 2010. 283(2): p. 157-69.
PMID: 20039179