PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
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Oryza barthii (85) | OBART01G01830.1 | MYB family protein |
OBART01G02710.1 | MYB family protein | |
OBART01G04450.1 | MYB family protein | |
OBART01G08110.1 | MYB family protein | |
OBART01G08110.2 | MYB family protein | |
OBART01G08110.3 | MYB family protein | |
OBART01G11800.1 | MYB family protein | |
OBART01G11910.1 | MYB family protein | |
OBART01G12500.1 | MYB family protein | |
OBART01G18830.1 | MYB family protein | |
OBART01G24030.1 | MYB family protein | |
OBART01G26850.1 | MYB family protein | |
OBART01G29250.1 | MYB family protein | |
OBART01G34660.1 | MYB family protein | |
OBART01G34660.2 | MYB family protein | |
OBART01G36770.1 | MYB family protein | |
OBART01G36770.2 | MYB family protein | |
OBART01G37390.1 | MYB family protein | |
OBART01G37590.1 | MYB family protein | |
OBART01G37610.1 | MYB family protein | |
OBART01G37720.1 | MYB family protein | |
OBART01G38220.1 | MYB family protein | |
OBART01G45730.1 | MYB family protein | |
OBART01G45880.1 | MYB family protein | |
OBART02G11770.1 | MYB family protein | |
OBART02G21860.1 | MYB family protein | |
OBART02G24300.1 | MYB family protein | |
OBART02G25570.1 | MYB family protein | |
OBART02G28790.1 | MYB family protein | |
OBART02G32900.1 | MYB family protein | |
OBART02G35180.1 | MYB family protein | |
OBART03G09760.1 | MYB family protein | |
OBART03G13840.1 | MYB family protein | |
OBART03G14380.1 | MYB family protein | |
OBART03G24120.1 | MYB family protein | |
OBART03G32240.1 | MYB family protein | |
OBART03G35660.1 | MYB family protein | |
OBART04G04830.1 | MYB family protein | |
OBART04G08350.1 | MYB family protein | |
OBART04G09800.1 | MYB family protein | |
OBART04G14990.1 | MYB family protein | |
OBART04G19730.1 | MYB family protein | |
OBART04G20790.1 | MYB family protein | |
OBART04G23600.1 | MYB family protein | |
OBART04G23680.1 | MYB family protein | |
OBART04G29570.1 | MYB family protein | |
OBART05G01080.1 | MYB family protein | |
OBART05G02690.1 | MYB family protein | |
OBART05G18190.1 | MYB family protein | |
OBART05G19200.1 | MYB family protein | |
OBART05G21120.1 | MYB family protein | |
OBART06G00820.1 | MYB family protein | |
OBART06G04170.1 | MYB family protein | |
OBART06G04170.2 | MYB family protein | |
OBART06G04890.1 | MYB family protein | |
OBART06G07710.1 | MYB family protein | |
OBART06G09910.1 | MYB family protein | |
OBART06G20450.1 | MYB family protein | |
OBART06G22170.1 | MYB family protein | |
OBART07G02450.1 | MYB family protein | |
OBART07G07440.1 | MYB family protein | |
OBART07G07450.1 | MYB family protein | |
OBART07G08680.1 | MYB family protein | |
OBART07G15150.1 | MYB family protein | |
OBART07G18450.1 | MYB family protein | |
OBART07G20460.1 | MYB family protein | |
OBART07G22930.1 | MYB family protein | |
OBART07G26990.1 | MYB family protein | |
OBART08G03020.1 | MYB family protein | |
OBART08G07560.1 | MYB family protein | |
OBART08G15700.1 | MYB family protein | |
OBART08G15790.1 | MYB family protein | |
OBART08G16740.1 | MYB family protein | |
OBART09G00310.1 | MYB family protein | |
OBART10G06850.1 | MYB family protein | |
OBART10G14710.1 | MYB family protein | |
OBART11G04950.1 | MYB family protein | |
OBART12G01420.1 | MYB family protein | |
OBART12G04480.1 | MYB family protein | |
OBART12G04500.1 | MYB family protein | |
OBART12G07040.1 | MYB family protein | |
OBART12G07040.2 | MYB family protein | |
OBART12G13720.1 | MYB family protein | |
OBART12G16450.1 | MYB family protein | |
OBART12G19790.1 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504