PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Medtr1g006650.1 | GATA family protein | |
Medtr1g016170.1 | GATA family protein | |
Medtr1g016200.1 | GATA family protein | |
Medtr1g045040.1 | GATA family protein | |
Medtr1g046680.1 | GATA family protein | |
Medtr1g046680.2 | GATA family protein | |
Medtr1g089830.1 | GATA family protein | |
Medtr1g094930.1 | GATA family protein | |
Medtr1g094930.2 | GATA family protein | |
Medtr1g116010.1 | GATA family protein | |
Medtr2g006900.1 | GATA family protein | |
Medtr2g038720.1 | GATA family protein | |
Medtr2g059300.1 | GATA family protein | |
Medtr2g094600.1 | GATA family protein | |
Medtr3g060200.1 | GATA family protein | |
Medtr3g060200.2 | GATA family protein | |
Medtr3g060200.3 | GATA family protein | |
Medtr3g060200.4 | GATA family protein | |
Medtr3g060200.5 | GATA family protein | |
Medtr3g060200.6 | GATA family protein | |
Medtr3g100040.1 | GATA family protein | |
Medtr3g100040.2 | GATA family protein | |
Medtr3g100050.1 | GATA family protein | |
Medtr3g109760.1 | GATA family protein | |
Medtr3g117380.1 | GATA family protein | |
Medtr4g008070.1 | GATA family protein | |
Medtr4g058910.1 | GATA family protein | |
Medtr4g071590.1 | GATA family protein | |
Medtr4g093730.1 | GATA family protein | |
Medtr4g099410.1 | GATA family protein | |
Medtr4g121110.1 | GATA family protein | |
Medtr4g126350.1 | GATA family protein | |
Medtr4g471590.1 | GATA family protein | |
Medtr4g471590.2 | GATA family protein | |
Medtr5g007600.1 | GATA family protein | |
Medtr5g013370.1 | GATA family protein | |
Medtr5g013370.2 | GATA family protein | |
Medtr5g020230.1 | GATA family protein | |
Medtr5g021340.1 | GATA family protein | |
Medtr5g066510.1 | GATA family protein | |
Medtr6g032830.1 | GATA family protein | |
Medtr7g085410.1 | GATA family protein | |
Medtr7g112330.1 | GATA family protein | |
Medtr7g445950.1 | GATA family protein | |
Medtr7g445980.1 | GATA family protein | |
Medtr7g446070.1 | GATA family protein | |
Medtr7g446110.1 | GATA family protein | |
Medtr8g013950.1 | GATA family protein | |
Medtr8g076340.1 | GATA family protein | |
Medtr8g077510.1 | GATA family protein | |
Medtr8g089130.1 | GATA family protein | |
Medtr8g089145.1 | GATA family protein | |
Medtr8g089170.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008