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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Lactuca sativa (31) | Lsa000578 | Trihelix family protein |
Lsa001582 | Trihelix family protein | |
Lsa001713 | Trihelix family protein | |
Lsa003078 | Trihelix family protein | |
Lsa003726 | Trihelix family protein | |
Lsa004130 | Trihelix family protein | |
Lsa004511 | Trihelix family protein | |
Lsa004643 | Trihelix family protein | |
Lsa005107 | Trihelix family protein | |
Lsa008609 | Trihelix family protein | |
Lsa010273 | Trihelix family protein | |
Lsa010488 | Trihelix family protein | |
Lsa010776 | Trihelix family protein | |
Lsa011316 | Trihelix family protein | |
Lsa011476 | Trihelix family protein | |
Lsa011628 | Trihelix family protein | |
Lsa011769 | Trihelix family protein | |
Lsa011991 | Trihelix family protein | |
Lsa012636 | Trihelix family protein | |
Lsa012697 | Trihelix family protein | |
Lsa012891 | Trihelix family protein | |
Lsa013232 | Trihelix family protein | |
Lsa013590 | Trihelix family protein | |
Lsa014565 | Trihelix family protein | |
Lsa016062 | Trihelix family protein | |
Lsa017165 | Trihelix family protein | |
Lsa017813 | Trihelix family protein | |
Lsa018757 | Trihelix family protein | |
Lsa018845 | Trihelix family protein | |
Lsa018903 | Trihelix family protein | |
Lsa019084 | Trihelix family protein |
GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes (Liu et al. 1999;Zhou 1999).
Fang Y, Xie K, Hou X, Hu H, Xiong L.
Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.
Mol Genet Genomics, 2010. 283(2): p. 157-69.
PMID: 20039179