PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Jatropha curcas (28) | Jcr4S00106.10 | GATA family protein |
Jcr4S00247.70 | GATA family protein | |
Jcr4S00326.60 | GATA family protein | |
Jcr4S00340.20 | GATA family protein | |
Jcr4S00379.110 | GATA family protein | |
Jcr4S00396.30 | GATA family protein | |
Jcr4S00524.100 | GATA family protein | |
Jcr4S00524.90 | GATA family protein | |
Jcr4S00584.140 | GATA family protein | |
Jcr4S00715.70 | GATA family protein | |
Jcr4S01973.10 | GATA family protein | |
Jcr4S01973.40 | GATA family protein | |
Jcr4S02115.70 | GATA family protein | |
Jcr4S02217.10 | GATA family protein | |
Jcr4S02729.20 | GATA family protein | |
Jcr4S03095.20 | GATA family protein | |
Jcr4S04807.10 | GATA family protein | |
Jcr4S05961.30 | GATA family protein | |
Jcr4S06414.10 | GATA family protein | |
Jcr4S09294.20 | GATA family protein | |
Jcr4S09378.30 | GATA family protein | |
Jcr4S09457.20 | GATA family protein | |
Jcr4S10464.20 | GATA family protein | |
Jcr4S11843.10 | GATA family protein | |
Jcr4S16123.20 | GATA family protein | |
Jcr4S16787.10 | GATA family protein | |
Jcr4S24993.30 | GATA family protein | |
Jcr4S28396.10 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008