PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Catharanthus roseus
LBD Family
Species TF ID Description
cra_locus_105375_iso_1LBD family protein
cra_locus_110461_iso_1LBD family protein
cra_locus_11305_iso_1LBD family protein
cra_locus_13739_iso_4LBD family protein
cra_locus_13802_iso_1LBD family protein
cra_locus_13802_iso_2LBD family protein
cra_locus_14316_iso_1LBD family protein
cra_locus_14960_iso_1LBD family protein
cra_locus_14964_iso_1LBD family protein
cra_locus_14964_iso_2LBD family protein
cra_locus_18199_iso_1LBD family protein
cra_locus_22149_iso_3LBD family protein
cra_locus_26578_iso_1LBD family protein
cra_locus_26578_iso_2LBD family protein
cra_locus_26589_iso_1LBD family protein
cra_locus_28872_iso_1LBD family protein
cra_locus_28872_iso_2LBD family protein
cra_locus_29873_iso_1LBD family protein
cra_locus_42252_iso_1LBD family protein
cra_locus_42252_iso_2LBD family protein
cra_locus_5382_iso_1LBD family protein
cra_locus_5382_iso_5LBD family protein
cra_locus_5382_iso_7LBD family protein
cra_locus_5382_iso_8LBD family protein
cra_locus_5382_iso_9LBD family protein
cra_locus_6516_iso_2LBD family protein
cra_locus_6516_iso_4LBD family protein
cra_locus_7344_iso_4LBD family protein
cra_locus_78855_iso_1LBD family protein
cra_locus_8584_iso_1LBD family protein
cra_locus_8584_iso_2LBD family protein
cra_locus_88501_iso_1LBD family protein
cra_locus_91283_iso_1LBD family protein
cra_locus_91283_iso_2LBD family protein
cra_locus_91445_iso_1LBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740