PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Coffea canephora (102) | Cc00_g08050 | MYB family protein |
Cc00_g11590 | MYB family protein | |
Cc00_g12150 | MYB family protein | |
Cc00_g16600 | MYB family protein | |
Cc00_g19890 | MYB family protein | |
Cc00_g21210 | MYB family protein | |
Cc01_g07440 | MYB family protein | |
Cc01_g10490 | MYB family protein | |
Cc01_g12280 | MYB family protein | |
Cc01_g14030 | MYB family protein | |
Cc01_g18370 | MYB family protein | |
Cc01_g21250 | MYB family protein | |
Cc02_g03030 | MYB family protein | |
Cc02_g03050 | MYB family protein | |
Cc02_g06940 | MYB family protein | |
Cc02_g07090 | MYB family protein | |
Cc02_g08900 | MYB family protein | |
Cc02_g08940 | MYB family protein | |
Cc02_g09550 | MYB family protein | |
Cc02_g11460 | MYB family protein | |
Cc02_g12210 | MYB family protein | |
Cc02_g12330 | MYB family protein | |
Cc02_g15530 | MYB family protein | |
Cc02_g16270 | MYB family protein | |
Cc02_g24840 | MYB family protein | |
Cc02_g27930 | MYB family protein | |
Cc02_g36000 | MYB family protein | |
Cc02_g37750 | MYB family protein | |
Cc03_g01140 | MYB family protein | |
Cc03_g05520 | MYB family protein | |
Cc03_g06560 | MYB family protein | |
Cc04_g01360 | MYB family protein | |
Cc04_g01380 | MYB family protein | |
Cc04_g01770 | MYB family protein | |
Cc04_g06620 | MYB family protein | |
Cc04_g07490 | MYB family protein | |
Cc04_g09080 | MYB family protein | |
Cc04_g11760 | MYB family protein | |
Cc04_g14230 | MYB family protein | |
Cc04_g16640 | MYB family protein | |
Cc05_g04370 | MYB family protein | |
Cc05_g05740 | MYB family protein | |
Cc05_g05870 | MYB family protein | |
Cc05_g05880 | MYB family protein | |
Cc05_g05900 | MYB family protein | |
Cc05_g05910 | MYB family protein | |
Cc05_g06000 | MYB family protein | |
Cc05_g13920 | MYB family protein | |
Cc05_g15570 | MYB family protein | |
Cc05_g16290 | MYB family protein | |
Cc06_g01610 | MYB family protein | |
Cc06_g01890 | MYB family protein | |
Cc06_g02630 | MYB family protein | |
Cc06_g04300 | MYB family protein | |
Cc06_g04470 | MYB family protein | |
Cc06_g07950 | MYB family protein | |
Cc06_g10860 | MYB family protein | |
Cc06_g13520 | MYB family protein | |
Cc06_g17200 | MYB family protein | |
Cc06_g21040 | MYB family protein | |
Cc07_g02010 | MYB family protein | |
Cc07_g03350 | MYB family protein | |
Cc07_g03580 | MYB family protein | |
Cc07_g04430 | MYB family protein | |
Cc07_g06450 | MYB family protein | |
Cc07_g07500 | MYB family protein | |
Cc07_g09050 | MYB family protein | |
Cc07_g11350 | MYB family protein | |
Cc07_g12090 | MYB family protein | |
Cc07_g13370 | MYB family protein | |
Cc07_g15050 | MYB family protein | |
Cc07_g15700 | MYB family protein | |
Cc07_g18210 | MYB family protein | |
Cc08_g01850 | MYB family protein | |
Cc08_g03040 | MYB family protein | |
Cc08_g03060 | MYB family protein | |
Cc08_g03070 | MYB family protein | |
Cc08_g03080 | MYB family protein | |
Cc08_g03110 | MYB family protein | |
Cc08_g09030 | MYB family protein | |
Cc08_g12080 | MYB family protein | |
Cc08_g12180 | MYB family protein | |
Cc08_g13110 | MYB family protein | |
Cc08_g14220 | MYB family protein | |
Cc08_g15180 | MYB family protein | |
Cc08_g16530 | MYB family protein | |
Cc09_g04740 | MYB family protein | |
Cc10_g03870 | MYB family protein | |
Cc10_g04940 | MYB family protein | |
Cc10_g07170 | MYB family protein | |
Cc10_g07810 | MYB family protein | |
Cc10_g10310 | MYB family protein | |
Cc10_g13160 | MYB family protein | |
Cc11_g00490 | MYB family protein | |
Cc11_g03070 | MYB family protein | |
Cc11_g08820 | MYB family protein | |
Cc11_g08830 | MYB family protein | |
Cc11_g09930 | MYB family protein | |
Cc11_g12690 | MYB family protein | |
Cc11_g12850 | MYB family protein | |
Cc11_g13330 | MYB family protein | |
Cc11_g16370 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504