PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Coffea canephora
LBD Family
Species TF ID Description
Cc00_g15720LBD family protein
Cc01_g04350LBD family protein
Cc01_g11610LBD family protein
Cc01_g14740LBD family protein
Cc01_g15120LBD family protein
Cc01_g18510LBD family protein
Cc01_g18520LBD family protein
Cc02_g05620LBD family protein
Cc02_g05630LBD family protein
Cc02_g06040LBD family protein
Cc02_g06210LBD family protein
Cc02_g07490LBD family protein
Cc02_g19720LBD family protein
Cc02_g32250LBD family protein
Cc02_g36620LBD family protein
Cc02_g36630LBD family protein
Cc04_g07130LBD family protein
Cc04_g11850LBD family protein
Cc04_g15810LBD family protein
Cc04_g15940LBD family protein
Cc05_g16210LBD family protein
Cc06_g20540LBD family protein
Cc07_g01770LBD family protein
Cc07_g05740LBD family protein
Cc07_g06900LBD family protein
Cc09_g02750LBD family protein
Cc09_g02760LBD family protein
Cc09_g02770LBD family protein
Cc09_g04160LBD family protein
Cc09_g04320LBD family protein
Cc10_g05640LBD family protein
Cc11_g10040LBD family protein
Cc11_g10140LBD family protein
LBD Family Introduction

The in vitro DNA-binding and heterologous transcriptional activation studies presented here indicate that the LBD protein family represents a new class of DNA-binding transcription factors that recognize the cis-element GCGGCG. The DNA-binding activity is present within the LOB domain, which is conserved throughout the 43 Arabidopsis family members as well as LBD proteins in other plant species.

the LBD genes encode a novel class of DNA-binding transcription factors. Post-translational regulation of transcription factors is often crucial for control of gene expression. In our study, we demonstrate that members of the basic helix-loop-helix (bHLH) family of transcription factors are capable of interacting with LOB. The expression patterns of bHLH048 and LOB overlap at lateral organ boundaries. Interestingly, the interaction of bHLH048 with LOB results in reduced affinity of LOB for the consensus DNA motif. Thus, our studies suggest that bHLH048 post-translationally regulates the function of LOB at lateral organ boundaries.

Aman Husbands, Elizabeth M. Bell, Bin Shuai, Harley M.S. Smith, and Patricia S. Springer.
LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.
Nucleic Acids Res, 2007. 35(19): p. 6663-71.
PMID: 17913740