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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Gh_A01G0712 | NF-YB family protein | |
Gh_A01G1864 | NF-YB family protein | |
Gh_A02G0473 | NF-YB family protein | |
Gh_A02G1288 | NF-YB family protein | |
Gh_A05G0668 | NF-YB family protein | |
Gh_A05G1515 | NF-YB family protein | |
Gh_A05G2567 | NF-YB family protein | |
Gh_A07G0500 | NF-YB family protein | |
Gh_A07G1738 | NF-YB family protein | |
Gh_A08G0216 | NF-YB family protein | |
Gh_A08G1022 | NF-YB family protein | |
Gh_A09G0043 | NF-YB family protein | |
Gh_A09G2115 | NF-YB family protein | |
Gh_A09G2163 | NF-YB family protein | |
Gh_A10G1446 | NF-YB family protein | |
Gh_A10G1859 | NF-YB family protein | |
Gh_A11G0532 | NF-YB family protein | |
Gh_A11G1060 | NF-YB family protein | |
Gh_A11G1381 | NF-YB family protein | |
Gh_A11G2413 | NF-YB family protein | |
Gh_A11G2900 | NF-YB family protein | |
Gh_A13G1116 | NF-YB family protein | |
Gh_A13G1122 | NF-YB family protein | |
Gh_A13G1533 | NF-YB family protein | |
Gh_D01G0731 | NF-YB family protein | |
Gh_D01G2107 | NF-YB family protein | |
Gh_D02G0528 | NF-YB family protein | |
Gh_D03G0428 | NF-YB family protein | |
Gh_D05G0814 | NF-YB family protein | |
Gh_D05G1686 | NF-YB family protein | |
Gh_D05G2854 | NF-YB family protein | |
Gh_D07G0570 | NF-YB family protein | |
Gh_D07G1944 | NF-YB family protein | |
Gh_D08G0296 | NF-YB family protein | |
Gh_D08G1297 | NF-YB family protein | |
Gh_D09G0041 | NF-YB family protein | |
Gh_D09G2321 | NF-YB family protein | |
Gh_D09G2370 | NF-YB family protein | |
Gh_D10G1689 | NF-YB family protein | |
Gh_D10G2122 | NF-YB family protein | |
Gh_D11G0616 | NF-YB family protein | |
Gh_D11G1215 | NF-YB family protein | |
Gh_D11G1522 | NF-YB family protein | |
Gh_D11G2731 | NF-YB family protein | |
Gh_D11G3286 | NF-YB family protein | |
Gh_D13G1387 | NF-YB family protein | |
Gh_D13G1393 | NF-YB family protein | |
Gh_D13G1867 | NF-YB family protein | |
Gh_Sca079468G01 | NF-YB family protein | |
Gh_Sca130119G01 | NF-YB family protein | |
Gh_Sca153686G01 | NF-YB family protein | |
Gh_Sca156698G01 | NF-YB family protein |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982