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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Camelina sativa (44) | Csa01g036280.1 | NF-YB family protein |
Csa03g012440.1 | NF-YB family protein | |
Csa03g025850.1 | NF-YB family protein | |
Csa04g039370.1 | NF-YB family protein | |
Csa04g050630.1 | NF-YB family protein | |
Csa04g052850.1 | NF-YB family protein | |
Csa04g067900.1 | NF-YB family protein | |
Csa05g001360.1 | NF-YB family protein | |
Csa05g014420.1 | NF-YB family protein | |
Csa05g016790.1 | NF-YB family protein | |
Csa05g041450.1 | NF-YB family protein | |
Csa06g027800.1 | NF-YB family protein | |
Csa06g039740.1 | NF-YB family protein | |
Csa06g042820.1 | NF-YB family protein | |
Csa06g054340.1 | NF-YB family protein | |
Csa07g060940.1 | NF-YB family protein | |
Csa08521s010.1 | NF-YB family protein | |
Csa08g017450.1 | NF-YB family protein | |
Csa08g056180.1 | NF-YB family protein | |
Csa09g061650.1 | NF-YB family protein | |
Csa09g061650.2 | NF-YB family protein | |
Csa10g031970.1 | NF-YB family protein | |
Csa11g038610.1 | NF-YB family protein | |
Csa11g064030.1 | NF-YB family protein | |
Csa11g064060.1 | NF-YB family protein | |
Csa12g057280.1 | NF-YB family protein | |
Csa13g010210.1 | NF-YB family protein | |
Csa13g027700.1 | NF-YB family protein | |
Csa14271s010.1 | NF-YB family protein | |
Csa14g010490.1 | NF-YB family protein | |
Csa14g027200.1 | NF-YB family protein | |
Csa15g065860.1 | NF-YB family protein | |
Csa15g066860.1 | NF-YB family protein | |
Csa16g051550.1 | NF-YB family protein | |
Csa17g012530.1 | NF-YB family protein | |
Csa17g028800.1 | NF-YB family protein | |
Csa18g002140.1 | NF-YB family protein | |
Csa18g002170.1 | NF-YB family protein | |
Csa19g043340.1 | NF-YB family protein | |
Csa20g011590.1 | NF-YB family protein | |
Csa20g038010.1 | NF-YB family protein | |
Csa20g082130.1 | NF-YB family protein | |
Csa20g082160.1 | NF-YB family protein | |
Csa31362s010.1 | NF-YB family protein |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982