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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Brassica napus (48) | GSBRNA2T00001940001 | NF-YB family protein |
GSBRNA2T00005462001 | NF-YB family protein | |
GSBRNA2T00005464001 | NF-YB family protein | |
GSBRNA2T00008339001 | NF-YB family protein | |
GSBRNA2T00010034001 | NF-YB family protein | |
GSBRNA2T00015960001 | NF-YB family protein | |
GSBRNA2T00018200001 | NF-YB family protein | |
GSBRNA2T00025985001 | NF-YB family protein | |
GSBRNA2T00033462001 | NF-YB family protein | |
GSBRNA2T00033465001 | NF-YB family protein | |
GSBRNA2T00041612001 | NF-YB family protein | |
GSBRNA2T00044690001 | NF-YB family protein | |
GSBRNA2T00045935001 | NF-YB family protein | |
GSBRNA2T00047285001 | NF-YB family protein | |
GSBRNA2T00063695001 | NF-YB family protein | |
GSBRNA2T00066656001 | NF-YB family protein | |
GSBRNA2T00069871001 | NF-YB family protein | |
GSBRNA2T00069875001 | NF-YB family protein | |
GSBRNA2T00071657001 | NF-YB family protein | |
GSBRNA2T00072378001 | NF-YB family protein | |
GSBRNA2T00072381001 | NF-YB family protein | |
GSBRNA2T00076539001 | NF-YB family protein | |
GSBRNA2T00079089001 | NF-YB family protein | |
GSBRNA2T00080759001 | NF-YB family protein | |
GSBRNA2T00086075001 | NF-YB family protein | |
GSBRNA2T00094725001 | NF-YB family protein | |
GSBRNA2T00100529001 | NF-YB family protein | |
GSBRNA2T00109108001 | NF-YB family protein | |
GSBRNA2T00110047001 | NF-YB family protein | |
GSBRNA2T00112245001 | NF-YB family protein | |
GSBRNA2T00116872001 | NF-YB family protein | |
GSBRNA2T00118663001 | NF-YB family protein | |
GSBRNA2T00123828001 | NF-YB family protein | |
GSBRNA2T00124805001 | NF-YB family protein | |
GSBRNA2T00128824001 | NF-YB family protein | |
GSBRNA2T00128826001 | NF-YB family protein | |
GSBRNA2T00129475001 | NF-YB family protein | |
GSBRNA2T00132524001 | NF-YB family protein | |
GSBRNA2T00133043001 | NF-YB family protein | |
GSBRNA2T00135034001 | NF-YB family protein | |
GSBRNA2T00136053001 | NF-YB family protein | |
GSBRNA2T00137554001 | NF-YB family protein | |
GSBRNA2T00138879001 | NF-YB family protein | |
GSBRNA2T00146111001 | NF-YB family protein | |
GSBRNA2T00148306001 | NF-YB family protein | |
GSBRNA2T00149966001 | NF-YB family protein | |
GSBRNA2T00152863001 | NF-YB family protein | |
GSBRNA2T00155032001 | NF-YB family protein |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982