![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
AT1G09030.1 | nuclear factor Y, subunit B4 | |
AT1G21970.1 | NF-YB family protein | |
AT2G13570.1 | nuclear factor Y, subunit B7 | |
AT2G27470.1 | nuclear factor Y, subunit B11 | |
AT2G37060.1 | nuclear factor Y, subunit B8 | |
AT2G37060.2 | nuclear factor Y, subunit B8 | |
AT2G37060.3 | nuclear factor Y, subunit B8 | |
AT2G38880.1 | nuclear factor Y, subunit B1 | |
AT2G38880.2 | nuclear factor Y, subunit B1 | |
AT2G38880.3 | nuclear factor Y, subunit B1 | |
AT2G38880.4 | nuclear factor Y, subunit B1 | |
AT2G38880.5 | nuclear factor Y, subunit B1 | |
AT2G38880.6 | nuclear factor Y, subunit B1 | |
AT2G38880.7 | nuclear factor Y, subunit B1 | |
AT2G38880.8 | nuclear factor Y, subunit B1 | |
AT2G47810.1 | nuclear factor Y, subunit B5 | |
AT3G53340.1 | nuclear factor Y, subunit B10 | |
AT4G14540.1 | nuclear factor Y, subunit B3 | |
AT5G08190.1 | nuclear factor Y, subunit B12 | |
AT5G08190.2 | nuclear factor Y, subunit B12 | |
AT5G23090.1 | nuclear factor Y, subunit B13 | |
AT5G23090.2 | nuclear factor Y, subunit B13 | |
AT5G23090.3 | nuclear factor Y, subunit B13 | |
AT5G23090.4 | nuclear factor Y, subunit B13 | |
AT5G47640.1 | nuclear factor Y, subunit B2 | |
AT5G47670.1 | nuclear factor Y, subunit B6 | |
AT5G47670.2 | nuclear factor Y, subunit B6 |
NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
As with NF-YA, NF-YB and NF-YC families have well-described subunit interaction and DNA-binding domains ( Kim et al., 1996; Sinha et al., 1996; McNabb et al., 1997; Romier et al., 2003). The conserved regions of NF-YB and NF-YC have structural and amino acid homology to histone fold motifs. Specifically, NF-YB is related to the histone fold motifs of H2B histones, while NF-YC subunits are related to H2A histones (Mantovani, 1999).
Siefers N, Dang KK, Kumimoto RW, Bynum WE 4th, Tayrose G, Holt BF 3rd.
Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.
Plant Physiol, 2009. 149(2): p. 625-41.
PMID: 19019982