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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Nelumbo nucifera (134) | NNU_000106-RA | MYB family protein |
NNU_000139-RA | MYB family protein | |
NNU_000153-RA | MYB family protein | |
NNU_000186-RA | MYB family protein | |
NNU_000372-RA | MYB family protein | |
NNU_000601-RA | MYB family protein | |
NNU_000707-RA | MYB family protein | |
NNU_000781-RA | MYB family protein | |
NNU_000818-RA | MYB family protein | |
NNU_000848-RA | MYB family protein | |
NNU_000867-RA | MYB family protein | |
NNU_001180-RA | MYB family protein | |
NNU_001188-RA | MYB family protein | |
NNU_001270-RA | MYB family protein | |
NNU_001478-RA | MYB family protein | |
NNU_001877-RA | MYB family protein | |
NNU_001878-RA | MYB family protein | |
NNU_001879-RA | MYB family protein | |
NNU_001956-RA | MYB family protein | |
NNU_002120-RA | MYB family protein | |
NNU_002533-RA | MYB family protein | |
NNU_002716-RA | MYB family protein | |
NNU_002798-RA | MYB family protein | |
NNU_002865-RA | MYB family protein | |
NNU_003001-RA | MYB family protein | |
NNU_003474-RA | MYB family protein | |
NNU_003638-RA | MYB family protein | |
NNU_004184-RA | MYB family protein | |
NNU_004301-RA | MYB family protein | |
NNU_004366-RA | MYB family protein | |
NNU_004379-RA | MYB family protein | |
NNU_004392-RA | MYB family protein | |
NNU_004634-RA | MYB family protein | |
NNU_004704-RA | MYB family protein | |
NNU_005489-RA | MYB family protein | |
NNU_005654-RA | MYB family protein | |
NNU_005786-RA | MYB family protein | |
NNU_005941-RA | MYB family protein | |
NNU_006750-RA | MYB family protein | |
NNU_006755-RA | MYB family protein | |
NNU_006777-RA | MYB family protein | |
NNU_006968-RA | MYB family protein | |
NNU_007463-RA | MYB family protein | |
NNU_007495-RA | MYB family protein | |
NNU_007679-RA | MYB family protein | |
NNU_007682-RA | MYB family protein | |
NNU_008083-RA | MYB family protein | |
NNU_008464-RA | MYB family protein | |
NNU_008484-RA | MYB family protein | |
NNU_008766-RA | MYB family protein | |
NNU_008785-RA | MYB family protein | |
NNU_009339-RA | MYB family protein | |
NNU_009511-RA | MYB family protein | |
NNU_009774-RA | MYB family protein | |
NNU_009907-RA | MYB family protein | |
NNU_009950-RA | MYB family protein | |
NNU_010650-RA | MYB family protein | |
NNU_010651-RA | MYB family protein | |
NNU_010652-RA | MYB family protein | |
NNU_010653-RA | MYB family protein | |
NNU_010741-RA | MYB family protein | |
NNU_010894-RA | MYB family protein | |
NNU_011160-RA | MYB family protein | |
NNU_011197-RA | MYB family protein | |
NNU_011222-RA | MYB family protein | |
NNU_012051-RA | MYB family protein | |
NNU_012170-RA | MYB family protein | |
NNU_012173-RA | MYB family protein | |
NNU_012174-RA | MYB family protein | |
NNU_012203-RA | MYB family protein | |
NNU_012205-RA | MYB family protein | |
NNU_012420-RA | MYB family protein | |
NNU_012454-RA | MYB family protein | |
NNU_012608-RA | MYB family protein | |
NNU_012714-RA | MYB family protein | |
NNU_012721-RA | MYB family protein | |
NNU_013179-RA | MYB family protein | |
NNU_013657-RA | MYB family protein | |
NNU_013693-RA | MYB family protein | |
NNU_013736-RA | MYB family protein | |
NNU_014177-RA | MYB family protein | |
NNU_014515-RA | MYB family protein | |
NNU_014897-RA | MYB family protein | |
NNU_015103-RA | MYB family protein | |
NNU_015121-RA | MYB family protein | |
NNU_015122-RA | MYB family protein | |
NNU_015264-RA | MYB family protein | |
NNU_015932-RA | MYB family protein | |
NNU_016471-RA | MYB family protein | |
NNU_017657-RA | MYB family protein | |
NNU_017666-RA | MYB family protein | |
NNU_018238-RA | MYB family protein | |
NNU_018240-RA | MYB family protein | |
NNU_018241-RA | MYB family protein | |
NNU_018624-RA | MYB family protein | |
NNU_018719-RA | MYB family protein | |
NNU_018764-RA | MYB family protein | |
NNU_018786-RA | MYB family protein | |
NNU_018831-RA | MYB family protein | |
NNU_019195-RA | MYB family protein | |
NNU_019505-RA | MYB family protein | |
NNU_019647-RA | MYB family protein | |
NNU_019785-RA | MYB family protein | |
NNU_019884-RA | MYB family protein | |
NNU_019956-RA | MYB family protein | |
NNU_020134-RA | MYB family protein | |
NNU_020783-RA | MYB family protein | |
NNU_020784-RA | MYB family protein | |
NNU_020797-RA | MYB family protein | |
NNU_021257-RA | MYB family protein | |
NNU_021320-RA | MYB family protein | |
NNU_021720-RA | MYB family protein | |
NNU_021901-RA | MYB family protein | |
NNU_021902-RA | MYB family protein | |
NNU_021903-RA | MYB family protein | |
NNU_021924-RA | MYB family protein | |
NNU_022331-RA | MYB family protein | |
NNU_022347-RA | MYB family protein | |
NNU_022395-RA | MYB family protein | |
NNU_022568-RA | MYB family protein | |
NNU_022886-RA | MYB family protein | |
NNU_023012-RA | MYB family protein | |
NNU_023434-RA | MYB family protein | |
NNU_023894-RA | MYB family protein | |
NNU_024187-RA | MYB family protein | |
NNU_024306-RA | MYB family protein | |
NNU_024446-RA | MYB family protein | |
NNU_024612-RA | MYB family protein | |
NNU_025014-RA | MYB family protein | |
NNU_025233-RA | MYB family protein | |
NNU_025333-RA | MYB family protein | |
NNU_025385-RA | MYB family protein | |
NNU_025757-RA | MYB family protein | |
NNU_025963-RA | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504