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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Arabidopsis lyrata (149) | 314948 | MYB family protein |
315039 | MYB family protein | |
321463 | MYB family protein | |
322901 | MYB family protein | |
324558 | MYB family protein | |
324904 | MYB family protein | |
327351 | MYB family protein | |
328881 | MYB family protein | |
330465 | MYB family protein | |
330471 | MYB family protein | |
331771 | MYB family protein | |
331925 | MYB family protein | |
334927 | MYB family protein | |
335126 | MYB family protein | |
335127 | MYB family protein | |
335722 | MYB family protein | |
338851 | MYB family protein | |
339072 | MYB family protein | |
341076 | MYB family protein | |
347167 | MYB family protein | |
347705 | MYB family protein | |
347985 | MYB family protein | |
349318 | MYB family protein | |
349486 | MYB family protein | |
353481 | MYB family protein | |
354228 | MYB family protein | |
354789 | MYB family protein | |
355996 | MYB family protein | |
357679 | MYB family protein | |
470636 | MYB family protein | |
471078 | MYB family protein | |
471607 | MYB family protein | |
472077 | MYB family protein | |
472503 | MYB family protein | |
473608 | MYB family protein | |
473681 | MYB family protein | |
473935 | MYB family protein | |
474684 | MYB family protein | |
474823 | MYB family protein | |
475739 | MYB family protein | |
476090 | MYB family protein | |
476550 | MYB family protein | |
476577 | MYB family protein | |
476602 | MYB family protein | |
477086 | MYB family protein | |
477416 | MYB family protein | |
477540 | MYB family protein | |
477955 | MYB family protein | |
478147 | MYB family protein | |
478469 | MYB family protein | |
478481 | MYB family protein | |
478645 | MYB family protein | |
478795 | MYB family protein | |
479301 | MYB family protein | |
479838 | MYB family protein | |
479944 | MYB family protein | |
479983 | MYB family protein | |
481200 | MYB family protein | |
482173 | MYB family protein | |
482672 | MYB family protein | |
482816 | MYB family protein | |
483895 | MYB family protein | |
483923 | MYB family protein | |
484189 | MYB family protein | |
484568 | MYB family protein | |
484622 | MYB family protein | |
484660 | MYB family protein | |
484718 | MYB family protein | |
485364 | MYB family protein | |
485695 | MYB family protein | |
486007 | MYB family protein | |
486519 | MYB family protein | |
487412 | MYB family protein | |
487604 | MYB family protein | |
487691 | MYB family protein | |
487856 | MYB family protein | |
487937 | MYB family protein | |
487987 | MYB family protein | |
488320 | MYB family protein | |
488379 | MYB family protein | |
488535 | MYB family protein | |
488646 | MYB family protein | |
489496 | MYB family protein | |
489795 | MYB family protein | |
490409 | MYB family protein | |
490512 | MYB family protein | |
490626 | MYB family protein | |
490838 | MYB family protein | |
491433 | MYB family protein | |
492106 | MYB family protein | |
492601 | MYB family protein | |
492740 | MYB family protein | |
493095 | MYB family protein | |
493616 | MYB family protein | |
495021 | MYB family protein | |
495295 | MYB family protein | |
495585 | MYB family protein | |
496112 | MYB family protein | |
496240 | MYB family protein | |
496423 | MYB family protein | |
496754 | MYB family protein | |
496816 | MYB family protein | |
497036 | MYB family protein | |
497373 | MYB family protein | |
861189 | MYB family protein | |
862662 | MYB family protein | |
862733 | MYB family protein | |
864075 | MYB family protein | |
866329 | MYB family protein | |
868812 | MYB family protein | |
869410 | MYB family protein | |
870409 | MYB family protein | |
871418 | MYB family protein | |
877443 | MYB family protein | |
885378 | MYB family protein | |
885785 | MYB family protein | |
888116 | MYB family protein | |
888197 | MYB family protein | |
889207 | MYB family protein | |
891746 | MYB family protein | |
894261 | MYB family protein | |
894282 | MYB family protein | |
894283 | MYB family protein | |
894284 | MYB family protein | |
897073 | MYB family protein | |
897482 | MYB family protein | |
897586 | MYB family protein | |
899594 | MYB family protein | |
899987 | MYB family protein | |
902907 | MYB family protein | |
904425 | MYB family protein | |
905190 | MYB family protein | |
905992 | MYB family protein | |
906588 | MYB family protein | |
908364 | MYB family protein | |
908494 | MYB family protein | |
908528 | MYB family protein | |
909234 | MYB family protein | |
909643 | MYB family protein | |
912886 | MYB family protein | |
914801 | MYB family protein | |
915859 | MYB family protein | |
916273 | MYB family protein | |
916274 | MYB family protein | |
917913 | MYB family protein | |
918940 | MYB family protein | |
919385 | MYB family protein | |
919487 | MYB family protein | |
919978 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504